RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, 36 cores, 251 GB RAM RAxML-NG was called at 04-Jun-2021 14:14:36 as follows: raxml-ng --ancestral --msa /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/O60393/2_msa/O60393_nogap_msa.fasta --tree /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/O60393/3_mltree/O60393.raxml.bestTree_unrooted --model LG4X --prefix /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/O60393/4_raxmlng_ancestral/O60393 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622805276 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/O60393/2_msa/O60393_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 691 sites WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_B4ICW1_B4ICW1_DROSE_7238 are exactly identical! WARNING: Sequences tr_B4QB14_B4QB14_DROSI_7240 and tr_B4I8V3_B4I8V3_DROSE_7238 are exactly identical! WARNING: Sequences tr_E1C143_E1C143_CHICK_9031 and tr_A0A091JC58_A0A091JC58_EGRGA_188379 are exactly identical! WARNING: Sequences tr_E1C143_E1C143_CHICK_9031 and tr_A0A091VLX1_A0A091VLX1_NIPNI_128390 are exactly identical! WARNING: Sequences tr_E1C143_E1C143_CHICK_9031 and tr_A0A087QYX0_A0A087QYX0_APTFO_9233 are exactly identical! WARNING: Sequences tr_E1C143_E1C143_CHICK_9031 and tr_A0A0A0AQY1_A0A0A0AQY1_CHAVO_50402 are exactly identical! WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A226MXA1_A0A226MXA1_CALSU_9009 are exactly identical! WARNING: Sequences sp_O35690_PHX2B_MOUSE_10090 and tr_A0A2I3GB05_A0A2I3GB05_NOMLE_61853 are exactly identical! WARNING: Sequences sp_O35690_PHX2B_MOUSE_10090 and tr_G3QTR1_G3QTR1_GORGO_9595 are exactly identical! WARNING: Sequences sp_O35690_PHX2B_MOUSE_10090 and tr_H2QPD7_H2QPD7_PANTR_9598 are exactly identical! WARNING: Sequences sp_O35690_PHX2B_MOUSE_10090 and sp_Q99453_PHX2B_HUMAN_9606 are exactly identical! WARNING: Sequences sp_O35690_PHX2B_MOUSE_10090 and tr_A0A0D9RWY9_A0A0D9RWY9_CHLSB_60711 are exactly identical! WARNING: Sequences sp_O35690_PHX2B_MOUSE_10090 and tr_A0A2K6BFM4_A0A2K6BFM4_MACNE_9545 are exactly identical! WARNING: Sequences tr_G3QN78_G3QN78_GORGO_9595 and tr_H2PZM0_H2PZM0_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3QN78_G3QN78_GORGO_9595 and sp_O95076_ALX3_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1N5L3_G1N5L3_MELGA_9103 and tr_A0A2I0MFC7_A0A2I0MFC7_COLLI_8932 are exactly identical! WARNING: Sequences tr_Q292R2_Q292R2_DROPS_46245 and tr_B4GCX7_B4GCX7_DROPE_7234 are exactly identical! WARNING: Sequences tr_A0A2I3T6W2_A0A2I3T6W2_PANTR_9598 and tr_A0A2R9BYB8_A0A2R9BYB8_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2PY64_H2PY64_PANTR_9598 and sp_P23759_PAX7_HUMAN_9606 are exactly identical! WARNING: Sequences tr_H2PY64_H2PY64_PANTR_9598 and tr_A0A2R9AC01_A0A2R9AC01_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A3B5Q688_A0A3B5Q688_XIPMA_8083 and tr_A0A087YKF0_A0A087YKF0_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A088AMF9_A0A088AMF9_APIME_7460 and tr_A0A2A3EH84_A0A2A3EH84_APICC_94128 are exactly identical! WARNING: Sequences tr_H0XRJ8_H0XRJ8_OTOGA_30611 and tr_A0A2Y9S0K6_A0A2Y9S0K6_PHYCD_9755 are exactly identical! WARNING: Sequences tr_H2T173_H2T173_TAKRU_31033 and tr_Q4S3X1_Q4S3X1_TETNG_99883 are exactly identical! WARNING: Sequences sp_Q96QS3_ARX_HUMAN_9606 and tr_A0A0D9RPA5_A0A0D9RPA5_CHLSB_60711 are exactly identical! WARNING: Sequences sp_Q96QS3_ARX_HUMAN_9606 and tr_A0A2K6DJD2_A0A2K6DJD2_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7HMI2_F7HMI2_MACMU_9544 and tr_A0A2K5ZL55_A0A2K5ZL55_MANLE_9568 are exactly identical! WARNING: Sequences tr_H0YRH0_H0YRH0_TAEGU_59729 and tr_A0A087QMY0_A0A087QMY0_APTFO_9233 are exactly identical! WARNING: Sequences tr_H0Z1G4_H0Z1G4_TAEGU_59729 and tr_U3JVG7_U3JVG7_FICAL_59894 are exactly identical! WARNING: Sequences tr_A0A2R8PD18_A0A2R8PD18_CALJA_9483 and tr_A0A287BRW7_A0A287BRW7_PIG_9823 are exactly identical! WARNING: Sequences tr_A0A2R8PD18_A0A2R8PD18_CALJA_9483 and tr_E1BME7_E1BME7_BOVIN_9913 are exactly identical! WARNING: Sequences tr_A0A2R8PD18_A0A2R8PD18_CALJA_9483 and tr_A0A337SCW9_A0A337SCW9_FELCA_9685 are exactly identical! WARNING: Sequences tr_A0A2R8PD18_A0A2R8PD18_CALJA_9483 and tr_A0A2U3VMC9_A0A2U3VMC9_ODORO_9708 are exactly identical! WARNING: Sequences tr_A0A286ZPC4_A0A286ZPC4_PIG_9823 and tr_A0A2U4AQS1_A0A2U4AQS1_TURTR_9739 are exactly identical! WARNING: Sequences tr_A0A286ZPC4_A0A286ZPC4_PIG_9823 and tr_A0A2Y9JS14_A0A2Y9JS14_ENHLU_391180 are exactly identical! WARNING: Sequences tr_E3LXI2_E3LXI2_CAERE_31234 and tr_A0A261BLJ3_A0A261BLJ3_9PELO_1503980 are exactly identical! WARNING: Sequences tr_G7PFA3_G7PFA3_MACFA_9541 and tr_A0A2K6DWP0_A0A2K6DWP0_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A044R227_A0A044R227_ONCVO_6282 and tr_A0A182E8C1_A0A182E8C1_ONCOC_42157 are exactly identical! WARNING: Sequences tr_A0A096N4Y9_A0A096N4Y9_PAPAN_9555 and tr_A0A0D9QZU1_A0A0D9QZU1_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A096N4Y9_A0A096N4Y9_PAPAN_9555 and tr_A0A2K5LA39_A0A2K5LA39_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A096NH47_A0A096NH47_PAPAN_9555 and tr_A0A2K5MU88_A0A2K5MU88_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A096NJQ7_A0A096NJQ7_PAPAN_9555 and tr_A0A2K6AHW7_A0A2K6AHW7_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A091F0W8_A0A091F0W8_CORBR_85066 and tr_A0A091J9V4_A0A091J9V4_EGRGA_188379 are exactly identical! WARNING: Sequences tr_A0A091F0W8_A0A091F0W8_CORBR_85066 and tr_A0A091VLU5_A0A091VLU5_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091F0W8_A0A091F0W8_CORBR_85066 and tr_A0A093HBJ4_A0A093HBJ4_STRCA_441894 are exactly identical! WARNING: Sequences tr_A0A091F0W8_A0A091F0W8_CORBR_85066 and tr_A0A0A0AXJ7_A0A0A0AXJ7_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A091F388_A0A091F388_CORBR_85066 and tr_A0A093PYP2_A0A093PYP2_9PASS_328815 are exactly identical! WARNING: Sequences tr_A0A091F388_A0A091F388_CORBR_85066 and tr_A0A091W020_A0A091W020_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091F388_A0A091F388_CORBR_85066 and tr_A0A087R4U3_A0A087R4U3_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A091F388_A0A091F388_CORBR_85066 and tr_A0A091VDH3_A0A091VDH3_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A091F388_A0A091F388_CORBR_85066 and tr_A0A099YW85_A0A099YW85_TINGU_94827 are exactly identical! WARNING: Sequences tr_A0A091F388_A0A091F388_CORBR_85066 and tr_A0A091GVS8_A0A091GVS8_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A091F388_A0A091F388_CORBR_85066 and tr_A0A0A0ALT5_A0A0A0ALT5_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A091F388_A0A091F388_CORBR_85066 and tr_A0A091IBL5_A0A091IBL5_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A091IPI4_A0A091IPI4_EGRGA_188379 and tr_A0A091GFG7_A0A091GFG7_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A091UMS8_A0A091UMS8_NIPNI_128390 and tr_A0A0A0AP10_A0A0A0AP10_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A087QR57_A0A087QR57_APTFO_9233 and tr_A0A093GUE4_A0A093GUE4_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A087QR57_A0A087QR57_APTFO_9233 and tr_A0A091J0D4_A0A091J0D4_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A0V1NV53_A0A0V1NV53_9BILA_92180 and tr_A0A0V0U4K5_A0A0V0U4K5_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A151WUZ2_A0A151WUZ2_9HYME_64791 and tr_A0A151IZX3_A0A151IZX3_9HYME_471704 are exactly identical! WARNING: Sequences tr_A0A1S3RR13_A0A1S3RR13_SALSA_8030 and tr_A0A060YC01_A0A060YC01_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A226NL42_A0A226NL42_CALSU_9009 and tr_A0A226PZN7_A0A226PZN7_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2D0QQP4_A0A2D0QQP4_ICTPU_7998 and tr_A0A2D0QT11_A0A2D0QT11_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2U4ARL5_A0A2U4ARL5_TURTR_9739 and tr_A0A2Y9MLH6_A0A2Y9MLH6_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U4ARL5_A0A2U4ARL5_TURTR_9739 and tr_A0A2Y9TJS7_A0A2Y9TJS7_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2U4CFB7_A0A2U4CFB7_TURTR_9739 and tr_A0A2Y9PRZ1_A0A2Y9PRZ1_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U4CFB7_A0A2U4CFB7_TURTR_9739 and tr_A0A2Y9FLV2_A0A2Y9FLV2_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2Y9P0U9_A0A2Y9P0U9_DELLE_9749 and tr_A0A2Y9SD92_A0A2Y9SD92_PHYCD_9755 are exactly identical! WARNING: Duplicate sequences found: 68 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/O60393/4_raxmlng_ancestral/O60393.raxml.reduced.phy Alignment comprises 1 partitions and 691 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 691 Gaps: 67.07 % Invariant sites: 0.87 % NOTE: Binary MSA file created: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/O60393/4_raxmlng_ancestral/O60393.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/O60393/3_mltree/O60393.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 173 / 13840 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -285303.706081 [00:00:00 -285303.706081] Initial branch length optimization [00:00:02 -166610.386013] Model parameter optimization (eps = 0.100000) [00:00:47] Tree #1, final logLikelihood: -166118.431875 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.063327,0.113292) (0.057425,0.254494) (0.245973,0.706981) (0.633275,1.270086) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/O60393/4_raxmlng_ancestral/O60393.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/O60393/4_raxmlng_ancestral/O60393.raxml.ancestralStates Node-labeled tree saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/O60393/4_raxmlng_ancestral/O60393.raxml.ancestralTree Execution log saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/O60393/4_raxmlng_ancestral/O60393.raxml.log Analysis started: 04-Jun-2021 14:14:36 / finished: 04-Jun-2021 14:15:30 Elapsed time: 53.716 seconds