RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 12-Jul-2021 16:39:08 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/2_msa/O60216_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/3_mltree/O60216.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/4_raxmlng_ancestral/O60216 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1626097148 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/2_msa/O60216_nogap_msa.fasta [00:00:00] Loaded alignment with 994 taxa and 631 sites WARNING: Sequences tr_J3KI77_J3KI77_COCIM_246410 and tr_A0A0J7AUC1_A0A0J7AUC1_COCIT_404692 are exactly identical! WARNING: Sequences tr_B2WNZ2_B2WNZ2_PYRTR_426418 and tr_A0A2W1FI94_A0A2W1FI94_9PLEO_45151 are exactly identical! WARNING: Sequences tr_G3R826_G3R826_GORGO_9595 and tr_H2QWL8_H2QWL8_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3R826_G3R826_GORGO_9595 and sp_O60216_RAD21_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3R826_G3R826_GORGO_9595 and tr_A0A2R8ZFT3_A0A2R8ZFT3_PANPA_9597 are exactly identical! WARNING: Sequences tr_B8NPD0_B8NPD0_ASPFN_332952 and tr_Q2UMM0_Q2UMM0_ASPOR_510516 are exactly identical! WARNING: Sequences tr_B8NPD0_B8NPD0_ASPFN_332952 and tr_A0A1S9D617_A0A1S9D617_ASPOZ_5062 are exactly identical! WARNING: Sequences tr_A0A179UPB7_A0A179UPB7_BLAGS_559298 and tr_C5GF34_C5GF34_AJEDR_559297 are exactly identical! WARNING: Sequences tr_A0A2I3SVP4_A0A2I3SVP4_PANTR_9598 and tr_A0A2R8ZEV1_A0A2R8ZEV1_PANPA_9597 are exactly identical! WARNING: Sequences tr_F9G4A5_F9G4A5_FUSOF_660025 and tr_A0A0D2X9I3_A0A0D2X9I3_FUSO4_426428 are exactly identical! WARNING: Sequences tr_F9G4A5_F9G4A5_FUSOF_660025 and tr_N4TCR8_N4TCR8_FUSC1_1229664 are exactly identical! WARNING: Sequences tr_F9G4A5_F9G4A5_FUSOF_660025 and tr_X0C2G8_X0C2G8_FUSOX_1089458 are exactly identical! WARNING: Sequences tr_F9G4A5_F9G4A5_FUSOF_660025 and tr_A0A2H3STU1_A0A2H3STU1_FUSOX_5507 are exactly identical! WARNING: Sequences tr_F9G4A5_F9G4A5_FUSOF_660025 and tr_A0A2H3HTV1_A0A2H3HTV1_FUSOX_327505 are exactly identical! WARNING: Sequences tr_C6HJE7_C6HJE7_AJECH_544712 and tr_F0UIE1_F0UIE1_AJEC8_544711 are exactly identical! WARNING: Sequences tr_A0A158NJ26_A0A158NJ26_ATTCE_12957 and tr_A0A195BLB3_A0A195BLB3_9HYME_520822 are exactly identical! WARNING: Sequences tr_A0A0E0FX20_A0A0E0FX20_ORYNI_4536 and tr_A0A0D9YIM8_A0A0D9YIM8_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_A2QFG5_A2QFG5_ASPNC_425011 and tr_G3Y2Z6_G3Y2Z6_ASPNA_380704 are exactly identical! WARNING: Sequences tr_A2QFG5_A2QFG5_ASPNC_425011 and tr_A0A319AKH3_A0A319AKH3_9EURO_1450533 are exactly identical! WARNING: Sequences tr_F6UCA9_F6UCA9_MACMU_9544 and tr_A0A096NPL2_A0A096NPL2_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F6UCA9_F6UCA9_MACMU_9544 and tr_A0A0D9REV4_A0A0D9REV4_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F6UCA9_F6UCA9_MACMU_9544 and tr_A0A2K5MCM7_A0A2K5MCM7_CERAT_9531 are exactly identical! WARNING: Sequences tr_F6UCA9_F6UCA9_MACMU_9544 and tr_A0A2K6EA01_A0A2K6EA01_MACNE_9545 are exactly identical! WARNING: Sequences tr_F6UCA9_F6UCA9_MACMU_9544 and tr_A0A2K5YN78_A0A2K5YN78_MANLE_9568 are exactly identical! WARNING: Sequences tr_G7XBW2_G7XBW2_ASPKW_1033177 and tr_A0A146FD29_A0A146FD29_9EURO_1069201 are exactly identical! WARNING: Sequences tr_Q7XYH6_Q7XYH6_ORYSI_39946 and tr_I1NUA4_I1NUA4_ORYGL_4538 are exactly identical! WARNING: Sequences tr_I1QH04_I1QH04_ORYGL_4538 and tr_Q6YTK0_Q6YTK0_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_A0A0E0QGJ6_A0A0E0QGJ6_ORYRU_4529 and tr_A0A0D3GY60_A0A0D3GY60_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_F9XDG8_F9XDG8_ZYMTI_336722 and tr_A0A1X7RWJ1_A0A1X7RWJ1_ZYMTR_1276538 are exactly identical! WARNING: Sequences tr_G2Y0X4_G2Y0X4_BOTF4_999810 and tr_M7UVS8_M7UVS8_BOTF1_1290391 are exactly identical! WARNING: Sequences tr_F2SJR8_F2SJR8_TRIRC_559305 and tr_A0A178EQ58_A0A178EQ58_TRIRU_5551 are exactly identical! WARNING: Sequences tr_L2G280_L2G280_COLFN_1213859 and tr_T0KH63_T0KH63_COLGC_1237896 are exactly identical! WARNING: Sequences tr_S0DIU3_S0DIU3_GIBF5_1279085 and tr_A0A365N684_A0A365N684_GIBIN_948311 are exactly identical! WARNING: Sequences tr_V2XSF2_V2XSF2_MONRO_1381753 and tr_A0A0W0GBI4_A0A0W0GBI4_9AGAR_221103 are exactly identical! WARNING: Sequences tr_A0A015KG06_A0A015KG06_9GLOM_1432141 and tr_A0A2I1FST9_A0A2I1FST9_9GLOM_588596 are exactly identical! WARNING: Sequences tr_A0A015KG06_A0A015KG06_9GLOM_1432141 and tr_A0A2H5U7Y0_A0A2H5U7Y0_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A078HLC7_A0A078HLC7_BRANA_3708 and tr_A0A0D3AJB8_A0A0D3AJB8_BRAOL_109376 are exactly identical! WARNING: Sequences tr_A0A094EEF9_A0A094EEF9_9PEZI_1420912 and tr_A0A1B8GB50_A0A1B8GB50_9PEZI_342668 are exactly identical! WARNING: Sequences tr_X0BED1_X0BED1_FUSOX_1089458 and tr_A0A2H3U013_A0A2H3U013_FUSOX_5507 are exactly identical! WARNING: Sequences tr_V4UHJ8_V4UHJ8_9ROSI_85681 and tr_A0A2H5P500_A0A2H5P500_CITUN_55188 are exactly identical! WARNING: Sequences tr_A0A0F8WLN9_A0A0F8WLN9_9EURO_308745 and tr_A0A2T5LV62_A0A2T5LV62_9EURO_1392256 are exactly identical! WARNING: Sequences tr_A0A091VKB3_A0A091VKB3_NIPNI_128390 and tr_A0A091XJN8_A0A091XJN8_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A091VKB3_A0A091VKB3_NIPNI_128390 and tr_A0A0A0A5Z5_A0A0A0A5Z5_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A2I0MXF7_A0A2I0MXF7_COLLI_8932 and tr_A0A1V4KHG1_A0A1V4KHG1_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A100IRR0_A0A100IRR0_ASPNG_5061 and tr_A0A1L9N9U7_A0A1L9N9U7_ASPTU_767770 are exactly identical! WARNING: Sequences tr_A0A1S3X266_A0A1S3X266_TOBAC_4097 and tr_A0A1U7WG28_A0A1U7WG28_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1Y1WPG6_A0A1Y1WPG6_9FUNG_1314790 and tr_A0A1Y1YWW1_A0A1Y1YWW1_9FUNG_1314790 are exactly identical! WARNING: Sequences tr_A0A2H3BXZ0_A0A2H3BXZ0_9AGAR_1076256 and tr_A0A284QLU0_A0A284QLU0_9AGAR_47428 are exactly identical! WARNING: Sequences tr_A0A2K5NJ54_A0A2K5NJ54_CERAT_9531 and tr_A0A2K5YWI9_A0A2K5YWI9_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A2U4B3K7_A0A2U4B3K7_TURTR_9739 and tr_A0A2Y9LNJ8_A0A2Y9LNJ8_DELLE_9749 are exactly identical! WARNING: Duplicate sequences found: 50 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/4_raxmlng_ancestral/O60216.raxml.reduced.phy Alignment comprises 1 partitions and 631 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 631 Gaps: 29.51 % Invariant sites: 0.00 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/4_raxmlng_ancestral/O60216.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/3_mltree/O60216.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 158 / 12640 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -624173.722652 [00:00:00 -624173.722652] Initial branch length optimization [00:00:02 -326686.614929] Model parameter optimization (eps = 0.100000) RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 12-Jul-2021 17:38:59 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/2_msa/O60216_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/3_mltree/O60216.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/4_raxmlng_ancestral/O60216 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1626100739 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF WARNING: The model you specified on the command line (LG4X) will be ignored since the binary MSA file already contains a model definition. If you want to change the model, please re-run RAxML-NG with the original PHYLIP/FASTA alignment and --redo option. [00:00:00] Loading binary alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/4_raxmlng_ancestral/O60216.raxml.rba [00:00:00] Alignment comprises 994 taxa, 1 partitions and 631 patterns Partition 0: noname Model: LG4X+R4 Alignment sites: 631 Gaps: 29.51 % Invariant sites: 0.00 % Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] NOTE: Resuming execution from checkpoint (logLH: -326686.61, ML trees: 0, bootstraps: 0) [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 158 / 12640 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -326686.614929 [00:00:00 -326686.614929] Model parameter optimization (eps = 0.100000) [00:00:50] Tree #1, final logLikelihood: -326254.938283 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.129322,0.186007) (0.114633,0.313480) (0.281600,0.711241) (0.474445,1.559135) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/4_raxmlng_ancestral/O60216.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/4_raxmlng_ancestral/O60216.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/4_raxmlng_ancestral/O60216.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/4_raxmlng_ancestral/O60216.raxml.log Analysis started: 12-Jul-2021 17:38:59 / finished: 12-Jul-2021 17:39:55 Elapsed time: 55.960 seconds (this run) / 58.262 seconds (total with restarts) Consumed energy: 4.601 Wh