RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 04-Jul-2021 15:17:47 as follows: raxml-ng --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/2_msa/O60216_trimmed_msa.fasta --data-type AA --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/3_mltree/O60216 --seed 2 --threads 1 --tree rand{20} pars{20} Analysis options: run mode: ML tree search start tree(s): random (20) random seed: 2 tip-inner: OFF pattern compression: ON per-rate scalers: OFF site repeats: ON fast spr radius: AUTO spr subtree cutoff: 1.000000 branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), NONE/sequential [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/2_msa/O60216_trimmed_msa.fasta [00:00:00] Loaded alignment with 994 taxa and 56 sites WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A251P141_A0A251P141_PRUPE_3760 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_B9RM05_B9RM05_RICCO_3988 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_K7MUI0_K7MUI0_SOYBN_3847 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_F6H7V8_F6H7V8_VITVI_29760 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A061EUX1_A0A061EUX1_THECC_3641 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A067GEN6_A0A067GEN6_CITSI_2711 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A067KKZ2_A0A067KKZ2_JATCU_180498 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A0A0LJH2_A0A0A0LJH2_CUCSA_3659 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_W9SSS4_W9SSS4_9ROSA_981085 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_V4UHJ8_V4UHJ8_9ROSI_85681 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A0D2N455_A0A0D2N455_GOSRA_29730 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A0D2R6B0_A0A0D2R6B0_GOSRA_29730 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A0D2SDI6_A0A0D2SDI6_GOSRA_29730 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A0L9U2V3_A0A0L9U2V3_PHAAN_3914 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A151TAY3_A0A151TAY3_CAJCA_3821 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A1S3VYM3_A0A1S3VYM3_VIGRR_3916 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A1S3B551_A0A1S3B551_CUCME_3656 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A199UCD7_A0A199UCD7_MANES_3983 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A1U8IC05_A0A1U8IC05_GOSHI_3635 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A1U8IGF0_A0A1U8IGF0_GOSHI_3635 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A1U8JP34_A0A1U8JP34_GOSHI_3635 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A1U8KW89_A0A1U8KW89_GOSHI_3635 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A1U8LNH5_A0A1U8LNH5_GOSHI_3635 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A1U8MGL3_A0A1U8MGL3_GOSHI_3635 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A2I4FMK0_A0A2I4FMK0_JUGRE_51240 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A2I4HKC2_A0A2I4HKC2_JUGRE_51240 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A2H5P500_A0A2H5P500_CITUN_55188 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A2P5B9T7_A0A2P5B9T7_TREOI_63057 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A2P5C320_A0A2P5C320_PARAD_3476 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A2P6R535_A0A2P6R535_ROSCH_74649 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A2R6PZ28_A0A2R6PZ28_ACTCH_1590841 are exactly identical! WARNING: Sequences tr_V7B2C5_V7B2C5_PHAVU_3885 and tr_A0A2R6QAQ5_A0A2R6QAQ5_ACTCH_1590841 are exactly identical! WARNING: Sequences tr_B4NV22_B4NV22_DROSI_7240 and tr_E2AJN6_E2AJN6_CAMFO_104421 are exactly identical! WARNING: Sequences tr_B4NV22_B4NV22_DROSI_7240 and tr_O96689_O96689_DROME_7227 are exactly identical! WARNING: Sequences tr_B4NV22_B4NV22_DROSI_7240 and tr_B4NBQ2_B4NBQ2_DROWI_7260 are exactly identical! WARNING: Sequences tr_B4NV22_B4NV22_DROSI_7240 and tr_B3MWZ0_B3MWZ0_DROAN_7217 are exactly identical! WARNING: Sequences tr_B4NV22_B4NV22_DROSI_7240 and tr_B4GMA8_B4GMA8_DROPE_7234 are exactly identical! WARNING: Sequences tr_B4NV22_B4NV22_DROSI_7240 and tr_B4LQE4_B4LQE4_DROVI_7244 are exactly identical! WARNING: Sequences tr_B4NV22_B4NV22_DROSI_7240 and tr_B4KH82_B4KH82_DROMO_7230 are exactly identical! WARNING: Sequences tr_B4NV22_B4NV22_DROSI_7240 and tr_A0A0L0CGA2_A0A0L0CGA2_LUCCU_7375 are exactly identical! WARNING: Sequences tr_B4NV22_B4NV22_DROSI_7240 and tr_A0A1W4UY43_A0A1W4UY43_DROFC_30025 are exactly identical! WARNING: Sequences tr_E9HJL7_E9HJL7_DAPPU_6669 and tr_A0A0P5KPJ4_A0A0P5KPJ4_9CRUS_35525 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and sp_Q6TEL1_RA21A_DANRE_7955 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A1D5PM87_A0A1D5PM87_CHICK_9031 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and sp_Q61550_RAD21_MOUSE_10090 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_M3XPI1_M3XPI1_MUSPF_9669 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_H2LLQ2_H2LLQ2_ORYLA_8090 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_G1QY51_G1QY51_NOMLE_61853 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_G1P724_G1P724_MYOLU_59463 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_G3H0A3_G3H0A3_CRIGR_10029 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_G3R826_G3R826_GORGO_9595 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A2J8X314_A0A2J8X314_PONAB_9601 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_G1NIP0_G1NIP0_MELGA_9103 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_G1KKS2_G1KKS2_ANOCA_28377 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_G1SHV3_G1SHV3_RABIT_9986 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_E2QRU9_E2QRU9_CANLF_9615 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_H2QWL8_H2QWL8_PANTR_9598 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_F7FZP7_F7FZP7_ORNAN_9258 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_F6UVJ1_F6UVJ1_MONDO_13616 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_F6W1M4_F6W1M4_HORSE_9796 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_W5PKY8_W5PKY8_SHEEP_9940 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_Q4KLH7_Q4KLH7_RAT_10116 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_M4A2B6_M4A2B6_XIPMA_8083 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_M4AHY7_M4AHY7_XIPMA_8083 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_I3JJM8_I3JJM8_ORENI_8128 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_I3K7B5_I3K7B5_ORENI_8128 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_I3MMP5_I3MMP5_ICTTR_43179 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_H0XGN3_H0XGN3_OTOGA_30611 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_H0XL98_H0XL98_OTOGA_30611 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_H2SXS1_H2SXS1_TAKRU_31033 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_H0VNA7_H0VNA7_CAVPO_10141 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and sp_O60216_RAD21_HUMAN_9606 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_F6UCA9_F6UCA9_MACMU_9544 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_G5AT87_G5AT87_HETGA_10181 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_K7G1B4_K7G1B4_PELSI_13735 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_H3DP55_H3DP55_TETNG_99883 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_G3NF06_G3NF06_GASAC_69293 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_G3NSJ5_G3NSJ5_GASAC_69293 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_G3SR69_G3SR69_LOXAF_9785 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_G3WSK2_G3WSK2_SARHA_9305 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_H0ZQ03_H0ZQ03_TAEGU_59729 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_F7DGV6_F7DGV6_XENTR_8364 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_F7HYV6_F7HYV6_CALJA_9483 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_F1S1K0_F1S1K0_PIG_9823 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_H3B455_H3B455_LATCH_7897 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_D2HZV4_D2HZV4_AILME_9646 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and sp_Q3SWX9_RAD21_BOVIN_9913 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_L5KB54_L5KB54_PTEAL_9402 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_M3WIX0_M3WIX0_FELCA_9685 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_U3JHZ2_U3JHZ2_FICAL_59894 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_U3INM6_U3INM6_ANAPL_8839 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A3B1JQ14_A0A3B1JQ14_ASTMX_7994 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_W5LNA4_W5LNA4_ASTMX_7994 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_W5M661_W5M661_LEPOC_7918 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A087XD75_A0A087XD75_POEFO_48698 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A087YKA3_A0A087YKA3_POEFO_48698 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A096NPL2_A0A096NPL2_PAPAN_9555 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A091DXQ0_A0A091DXQ0_FUKDA_885580 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A0D9REV4_A0A0D9REV4_CHLSB_60711 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A0P7VU24_A0A0P7VU24_9TELE_113540 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A0P7ZAT6_A0A0P7ZAT6_9TELE_113540 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A151MXY1_A0A151MXY1_ALLMI_8496 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A0Q3X8P8_A0A0Q3X8P8_AMAAE_12930 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A091F6S5_A0A091F6S5_CORBR_85066 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A091J192_A0A091J192_EGRGA_188379 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A093QG52_A0A093QG52_9PASS_328815 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A091VKB3_A0A091VKB3_NIPNI_128390 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A087QY06_A0A087QY06_APTFO_9233 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A093K6H2_A0A093K6H2_STRCA_441894 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A091XJN8_A0A091XJN8_OPIHO_30419 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A099ZHH2_A0A099ZHH2_TINGU_94827 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A091FRC8_A0A091FRC8_9AVES_55661 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A0A0A5Z5_A0A0A0A5Z5_CHAVO_50402 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A2I0MXF7_A0A2I0MXF7_COLLI_8932 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A093GDH9_A0A093GDH9_DRYPU_118200 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A091HQ54_A0A091HQ54_CALAN_9244 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A1S2ZB86_A0A1S2ZB86_ERIEU_9365 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A1S3GFU3_A0A1S3GFU3_DIPOR_10020 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A1L8FZU2_A0A1L8FZU2_XENLA_8355 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_Q6DCL7_Q6DCL7_XENLA_8355 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A1U7TW74_A0A1U7TW74_TARSY_1868482 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A1U7SNS5_A0A1U7SNS5_ALLSI_38654 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A1U7QTD5_A0A1U7QTD5_MESAU_10036 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A1V4KHG1_A0A1V4KHG1_PATFA_372326 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A2I4ATM5_A0A2I4ATM5_9TELE_52670 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A2I4CPG6_A0A2I4CPG6_9TELE_52670 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A218VER9_A0A218VER9_9PASE_299123 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A226PSB4_A0A226PSB4_COLVI_9014 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A2D0PUW3_A0A2D0PUW3_ICTPU_7998 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A2D0PVT1_A0A2D0PVT1_ICTPU_7998 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A2D0PWA2_A0A2D0PWA2_ICTPU_7998 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A2D0PY14_A0A2D0PY14_ICTPU_7998 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A2K5MCM7_A0A2K5MCM7_CERAT_9531 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A2K6EA01_A0A2K6EA01_MACNE_9545 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A2K5YN78_A0A2K5YN78_MANLE_9568 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A2R8ZFT3_A0A2R8ZFT3_PANPA_9597 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A2U4B360_A0A2U4B360_TURTR_9739 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A2U4B3K7_A0A2U4B3K7_TURTR_9739 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A2U3WV72_A0A2U3WV72_ODORO_9708 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A2U3XSB3_A0A2U3XSB3_LEPWE_9713 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A2U9AZ79_A0A2U9AZ79_SCOMX_52904 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A2Y9DE68_A0A2Y9DE68_TRIMA_127582 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A2Y9JJ93_A0A2Y9JJ93_ENHLU_391180 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A2Y9LNJ8_A0A2Y9LNJ8_DELLE_9749 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A2Y9T8N8_A0A2Y9T8N8_PHYCD_9755 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A384BY46_A0A384BY46_URSMA_29073 are exactly identical! WARNING: Sequences tr_Q1L8E1_Q1L8E1_DANRE_7955 and tr_A0A384ANG1_A0A384ANG1_BALAS_310752 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_B6HSQ0_B6HSQ0_PENRW_500485 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_B8NPD0_B8NPD0_ASPFN_332952 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_Q4WHC9_Q4WHC9_ASPFU_330879 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_Q2UMM0_Q2UMM0_ASPOR_510516 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A1DG03_A1DG03_NEOFI_331117 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A2QFG5_A2QFG5_ASPNC_425011 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_G7XBW2_G7XBW2_ASPKW_1033177 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_Q0CHQ8_Q0CHQ8_ASPTN_341663 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_G3Y2Z6_G3Y2Z6_ASPNA_380704 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_K9FWS2_K9FWS2_PEND2_1170229 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_S7ZED0_S7ZED0_PENO1_933388 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A0A2KKG6_A0A0A2KKG6_PENIT_40296 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A0A2IKD3_A0A0A2IKD3_PENEN_27334 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_W6QHT0_W6QHT0_PENRF_1365484 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A0F0I6V9_A0A0F0I6V9_ASPPU_1403190 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A0F8WLN9_A0A0F8WLN9_9EURO_308745 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A0K8LRX0_A0A0K8LRX0_9EURO_91492 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A0L1IS57_A0A0L1IS57_ASPNO_1509407 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A0M9WKK1_A0A0M9WKK1_9EURO_229535 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A0F7TVQ0_A0A0F7TVQ0_9EURO_104259 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A0S7DX40_A0A0S7DX40_9EURO_293939 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A0G4PSJ2_A0A0G4PSJ2_PENCA_1429867 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A0U4Z467_A0A0U4Z467_9EURO_454130 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A101MFP5_A0A101MFP5_9EURO_48697 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A100IRR0_A0A100IRR0_ASPNG_5061 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A135LPX7_A0A135LPX7_PENPA_5078 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A146FD29_A0A146FD29_9EURO_1069201 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A1F5LGC5_A0A1F5LGC5_9EURO_1835702 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A1F8A4R3_A0A1F8A4R3_9EURO_109264 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A1L9PSP1_A0A1L9PSP1_ASPVE_1036611 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A1L9S7Z6_A0A1L9S7Z6_9EURO_1073090 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A1L9N9U7_A0A1L9N9U7_ASPTU_767770 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A1L9TEI8_A0A1L9TEI8_9EURO_1036612 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A1L9R6Y5_A0A1L9R6Y5_ASPWE_1073089 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A1L9UV21_A0A1L9UV21_9EURO_767769 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A1L9WUU7_A0A1L9WUU7_ASPAC_690307 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A1Q5T690_A0A1Q5T690_9EURO_1316194 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A1R3R8I0_A0A1R3R8I0_ASPC5_602072 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A1S9D617_A0A1S9D617_ASPOZ_5062 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A1V6NMB6_A0A1V6NMB6_9EURO_60169 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A1V6S7R6_A0A1V6S7R6_9EURO_29845 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A1V6RCC3_A0A1V6RCC3_9EURO_60172 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A1V6QEZ2_A0A1V6QEZ2_9EURO_416450 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A1V6ZAL5_A0A1V6ZAL5_PENNA_60175 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A229XMT5_A0A229XMT5_9EURO_1245748 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A397HFJ3_A0A397HFJ3_9EURO_41047 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A2G7FX69_A0A2G7FX69_9EURO_656916 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A2I2GC50_A0A2I2GC50_9EURO_1392250 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A2I1CLL8_A0A2I1CLL8_9EURO_1392255 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A2T5LV62_A0A2T5LV62_9EURO_1392256 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A317UN88_A0A317UN88_9EURO_1448314 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A317V4I3_A0A317V4I3_9EURO_1450535 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A319AKH3_A0A319AKH3_9EURO_1450533 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A319CZJ1_A0A319CZJ1_9EURO_1448320 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A319CLS3_A0A319CLS3_9EURO_1448315 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A318ZUS8_A0A318ZUS8_9EURO_1450539 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A319DTL8_A0A319DTL8_9EURO_1448318 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A2V5HY32_A0A2V5HY32_9EURO_1450541 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A395HI53_A0A395HI53_9EURO_1450537 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A395HAX5_A0A395HAX5_9EURO_1448316 are exactly identical! WARNING: Sequences tr_Q5AW65_Q5AW65_EMENI_227321 and tr_A0A2V5I6U0_A0A2V5I6U0_9EURO_1450538 are exactly identical! WARNING: Sequences tr_A0A0D1CRL6_A0A0D1CRL6_USTMA_237631 and tr_M9MAS6_M9MAS6_PSEA3_1151754 are exactly identical! WARNING: Sequences tr_A0A0D1CRL6_A0A0D1CRL6_USTMA_237631 and tr_R9NZD6_R9NZD6_PSEHS_1305764 are exactly identical! WARNING: Sequences sp_A2AU37_RD21L_MOUSE_10090 and tr_A0A2I3HZL3_A0A2I3HZL3_NOMLE_61853 are exactly identical! WARNING: Sequences sp_A2AU37_RD21L_MOUSE_10090 and tr_G3RQC0_G3RQC0_GORGO_9595 are exactly identical! WARNING: Sequences sp_A2AU37_RD21L_MOUSE_10090 and tr_H2P1G6_H2P1G6_PONAB_9601 are exactly identical! WARNING: Sequences sp_A2AU37_RD21L_MOUSE_10090 and tr_A0A2I3SVP4_A0A2I3SVP4_PANTR_9598 are exactly identical! WARNING: Sequences sp_A2AU37_RD21L_MOUSE_10090 and tr_D4ADQ7_D4ADQ7_RAT_10116 are exactly identical! WARNING: Sequences sp_A2AU37_RD21L_MOUSE_10090 and tr_I3NBE4_I3NBE4_ICTTR_43179 are exactly identical! WARNING: Sequences sp_A2AU37_RD21L_MOUSE_10090 and tr_H0XBI1_H0XBI1_OTOGA_30611 are exactly identical! WARNING: Sequences sp_A2AU37_RD21L_MOUSE_10090 and tr_A0A1D5QXR7_A0A1D5QXR7_MACMU_9544 are exactly identical! WARNING: Sequences sp_A2AU37_RD21L_MOUSE_10090 and tr_G3U1Y5_G3U1Y5_LOXAF_9785 are exactly identical! WARNING: Sequences sp_A2AU37_RD21L_MOUSE_10090 and tr_F7HZM8_F7HZM8_CALJA_9483 are exactly identical! WARNING: Sequences sp_A2AU37_RD21L_MOUSE_10090 and tr_G7PGR7_G7PGR7_MACFA_9541 are exactly identical! WARNING: Sequences sp_A2AU37_RD21L_MOUSE_10090 and tr_A0A096NV47_A0A096NV47_PAPAN_9555 are exactly identical! WARNING: Sequences sp_A2AU37_RD21L_MOUSE_10090 and tr_A0A2K5NJ54_A0A2K5NJ54_CERAT_9531 are exactly identical! WARNING: Sequences sp_A2AU37_RD21L_MOUSE_10090 and tr_A0A2K6DVP4_A0A2K6DVP4_MACNE_9545 are exactly identical! WARNING: Sequences sp_A2AU37_RD21L_MOUSE_10090 and tr_A0A2K5YWI9_A0A2K5YWI9_MANLE_9568 are exactly identical! WARNING: Sequences sp_A2AU37_RD21L_MOUSE_10090 and tr_A0A2R8ZEV1_A0A2R8ZEV1_PANPA_9597 are exactly identical! WARNING: Sequences tr_W5JGP0_W5JGP0_ANODA_43151 and tr_B0WAH9_B0WAH9_CULQU_7176 are exactly identical! WARNING: Sequences tr_W5JGP0_W5JGP0_ANODA_43151 and tr_Q7Q9W9_Q7Q9W9_ANOGA_7165 are exactly identical! WARNING: Sequences tr_W5JGP0_W5JGP0_ANODA_43151 and tr_J9HG26_J9HG26_AEDAE_7159 are exactly identical! WARNING: Sequences tr_W5JGP0_W5JGP0_ANODA_43151 and tr_A0A084WT84_A0A084WT84_ANOSI_74873 are exactly identical! WARNING: Sequences tr_M3Z2L7_M3Z2L7_MUSPF_9669 and tr_F1PWJ5_F1PWJ5_CANLF_9615 are exactly identical! WARNING: Sequences tr_M3Z2L7_M3Z2L7_MUSPF_9669 and tr_F6UIG6_F6UIG6_HORSE_9796 are exactly identical! WARNING: Sequences tr_M3Z2L7_M3Z2L7_MUSPF_9669 and tr_W5QBN5_W5QBN5_SHEEP_9940 are exactly identical! WARNING: Sequences tr_M3Z2L7_M3Z2L7_MUSPF_9669 and tr_E1B9J3_E1B9J3_BOVIN_9913 are exactly identical! WARNING: Sequences tr_M3Z2L7_M3Z2L7_MUSPF_9669 and tr_L5JZX1_L5JZX1_PTEAL_9402 are exactly identical! WARNING: Sequences tr_M3Z2L7_M3Z2L7_MUSPF_9669 and tr_A0A2U3V2A2_A0A2U3V2A2_TURTR_9739 are exactly identical! WARNING: Sequences tr_M3Z2L7_M3Z2L7_MUSPF_9669 and tr_A0A2U3VEG2_A0A2U3VEG2_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3Z2L7_M3Z2L7_MUSPF_9669 and tr_A0A2Y9ILM4_A0A2Y9ILM4_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3Z2L7_M3Z2L7_MUSPF_9669 and tr_A0A2Y9F7R7_A0A2Y9F7R7_PHYCD_9755 are exactly identical! WARNING: Sequences tr_M3Z2L7_M3Z2L7_MUSPF_9669 and tr_A0A384B178_A0A384B178_BALAS_310752 are exactly identical! WARNING: Sequences tr_E2M5B1_E2M5B1_MONPE_554373 and tr_K5XZL5_K5XZL5_AGABU_597362 are exactly identical! WARNING: Sequences tr_E2M5B1_E2M5B1_MONPE_554373 and tr_V2XSF2_V2XSF2_MONRO_1381753 are exactly identical! WARNING: Sequences tr_E2M5B1_E2M5B1_MONPE_554373 and tr_A0A0W0GBI4_A0A0W0GBI4_9AGAR_221103 are exactly identical! WARNING: Sequences tr_E2M5B1_E2M5B1_MONPE_554373 and tr_A0A369J7W2_A0A369J7W2_HYPMA_39966 are exactly identical! WARNING: Sequences tr_E2M5B1_E2M5B1_MONPE_554373 and tr_A0A286UG07_A0A286UG07_9HOMO_2282107 are exactly identical! WARNING: Sequences tr_E2M5B1_E2M5B1_MONPE_554373 and tr_A0A2H3DBB7_A0A2H3DBB7_ARMGA_47427 are exactly identical! WARNING: Sequences tr_E2M5B1_E2M5B1_MONPE_554373 and tr_A0A2H3BXZ0_A0A2H3BXZ0_9AGAR_1076256 are exactly identical! WARNING: Sequences tr_E2M5B1_E2M5B1_MONPE_554373 and tr_A0A284QLU0_A0A284QLU0_9AGAR_47428 are exactly identical! WARNING: Sequences tr_C5XFD5_C5XFD5_SORBI_4558 and tr_K3XE31_K3XE31_SETIT_4555 are exactly identical! WARNING: Sequences tr_C5XFD5_C5XFD5_SORBI_4558 and tr_J3L6R0_J3L6R0_ORYBR_4533 are exactly identical! WARNING: Sequences tr_C5XFD5_C5XFD5_SORBI_4558 and tr_A0A0E0FX20_A0A0E0FX20_ORYNI_4536 are exactly identical! WARNING: Sequences tr_C5XFD5_C5XFD5_SORBI_4558 and tr_Q7XYH6_Q7XYH6_ORYSI_39946 are exactly identical! WARNING: Sequences tr_C5XFD5_C5XFD5_SORBI_4558 and tr_A0A1D6N4J8_A0A1D6N4J8_MAIZE_4577 are exactly identical! WARNING: Sequences tr_C5XFD5_C5XFD5_SORBI_4558 and tr_K7VMM8_K7VMM8_MAIZE_4577 are exactly identical! WARNING: Sequences tr_C5XFD5_C5XFD5_SORBI_4558 and tr_I1NUA4_I1NUA4_ORYGL_4538 are exactly identical! WARNING: Sequences tr_C5XFD5_C5XFD5_SORBI_4558 and tr_A0A0E0CBK5_A0A0E0CBK5_9ORYZ_40149 are exactly identical! WARNING: Sequences tr_C5XFD5_C5XFD5_SORBI_4558 and tr_A0A0E0N691_A0A0E0N691_ORYRU_4529 are exactly identical! WARNING: Sequences tr_C5XFD5_C5XFD5_SORBI_4558 and tr_A0A0D3EXD6_A0A0D3EXD6_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_C5XFD5_C5XFD5_SORBI_4558 and tr_A0A0D9YIM8_A0A0D9YIM8_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_C5XFD5_C5XFD5_SORBI_4558 and tr_A0A0E0JS74_A0A0E0JS74_ORYPU_4537 are exactly identical! WARNING: Sequences tr_C5XFD5_C5XFD5_SORBI_4558 and tr_A0A0D9V907_A0A0D9V907_9ORYZ_77586 are exactly identical! WARNING: Sequences tr_C5XFD5_C5XFD5_SORBI_4558 and tr_Q5N861_Q5N861_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_C5XFD5_C5XFD5_SORBI_4558 and tr_A0A2T7DD47_A0A2T7DD47_9POAL_1504633 are exactly identical! WARNING: Sequences tr_Q0UZA2_Q0UZA2_PHANO_321614 and tr_A0A163C9D7_A0A163C9D7_DIDRA_5454 are exactly identical! WARNING: Sequences tr_Q0UZA2_Q0UZA2_PHANO_321614 and tr_A0A1Y2M215_A0A1Y2M215_EPING_105696 are exactly identical! WARNING: Sequences tr_Q2HD69_Q2HD69_CHAGB_306901 and tr_G2Q0R6_G2Q0R6_MYCTT_573729 are exactly identical! WARNING: Sequences tr_E3RDR7_E3RDR7_PYRTT_861557 and tr_B2WNZ2_B2WNZ2_PYRTR_426418 are exactly identical! WARNING: Sequences tr_E3RDR7_E3RDR7_PYRTT_861557 and tr_M2RIE3_M2RIE3_COCSN_665912 are exactly identical! WARNING: Sequences tr_E3RDR7_E3RDR7_PYRTT_861557 and tr_R0K5Z5_R0K5Z5_SETT2_671987 are exactly identical! WARNING: Sequences tr_E3RDR7_E3RDR7_PYRTT_861557 and tr_M2VAV7_M2VAV7_COCH5_701091 are exactly identical! WARNING: Sequences tr_E3RDR7_E3RDR7_PYRTT_861557 and tr_W6Y636_W6Y636_COCCA_930089 are exactly identical! WARNING: Sequences tr_E3RDR7_E3RDR7_PYRTT_861557 and tr_W6ZN01_W6ZN01_COCMI_930090 are exactly identical! WARNING: Sequences tr_E3RDR7_E3RDR7_PYRTT_861557 and tr_A0A2W1FI94_A0A2W1FI94_9PLEO_45151 are exactly identical! WARNING: Sequences tr_E3RDR7_E3RDR7_PYRTT_861557 and tr_A0A364N2G4_A0A364N2G4_9PLEO_183478 are exactly identical! WARNING: Sequences tr_B4JPH2_B4JPH2_DROGR_7222 and tr_A0A194Q4R0_A0A194Q4R0_PAPXU_66420 are exactly identical! WARNING: Sequences tr_B0D0D4_B0D0D4_LACBS_486041 and tr_J4GE01_J4GE01_9APHY_599839 are exactly identical! WARNING: Sequences tr_B0D0D4_B0D0D4_LACBS_486041 and tr_K5VCW0_K5VCW0_PHACS_650164 are exactly identical! WARNING: Sequences tr_B0D0D4_B0D0D4_LACBS_486041 and tr_M2QZP9_M2QZP9_CERS8_914234 are exactly identical! WARNING: Sequences tr_B0D0D4_B0D0D4_LACBS_486041 and tr_A0A067NUQ6_A0A067NUQ6_PLEOS_1137138 are exactly identical! WARNING: Sequences tr_B0D0D4_B0D0D4_LACBS_486041 and tr_A0A060STW5_A0A060STW5_PYCCI_5643 are exactly identical! WARNING: Sequences tr_B0D0D4_B0D0D4_LACBS_486041 and tr_A0A0C3SCG7_A0A0C3SCG7_PHLGI_745531 are exactly identical! WARNING: Sequences tr_B0D0D4_B0D0D4_LACBS_486041 and tr_A0A165GS32_A0A165GS32_9APHY_1314785 are exactly identical! WARNING: Sequences tr_B0D0D4_B0D0D4_LACBS_486041 and tr_A0A1C7M113_A0A1C7M113_GRIFR_5627 are exactly identical! WARNING: Sequences tr_B0D0D4_B0D0D4_LACBS_486041 and tr_A0A1M2VRM6_A0A1M2VRM6_TRAPU_154538 are exactly identical! WARNING: Sequences tr_B0D0D4_B0D0D4_LACBS_486041 and tr_A0A2H3J1W8_A0A2H3J1W8_WOLCO_742152 are exactly identical! WARNING: Sequences tr_B0D0D4_B0D0D4_LACBS_486041 and tr_A0A2G8SQ29_A0A2G8SQ29_9APHY_1077348 are exactly identical! WARNING: Sequences tr_B0D0D4_B0D0D4_LACBS_486041 and tr_A0A371D1I8_A0A371D1I8_9APHY_139420 are exactly identical! WARNING: Sequences tr_J3KI77_J3KI77_COCIM_246410 and tr_C4JFE0_C4JFE0_UNCRE_336963 are exactly identical! WARNING: Sequences tr_J3KI77_J3KI77_COCIM_246410 and tr_E9CV56_E9CV56_COCPS_443226 are exactly identical! WARNING: Sequences tr_J3KI77_J3KI77_COCIM_246410 and tr_A0A0J7AUC1_A0A0J7AUC1_COCIT_404692 are exactly identical! WARNING: Sequences tr_B6Q3B1_B6Q3B1_TALMQ_441960 and tr_B8LT48_B8LT48_TALSN_441959 are exactly identical! WARNING: Sequences tr_B6Q3B1_B6Q3B1_TALMQ_441960 and tr_V5GB23_V5GB23_BYSSN_1356009 are exactly identical! WARNING: Sequences tr_B6Q3B1_B6Q3B1_TALMQ_441960 and tr_A0A093Y7H2_A0A093Y7H2_TALMA_1077442 are exactly identical! WARNING: Sequences tr_B6Q3B1_B6Q3B1_TALMQ_441960 and tr_A0A0F4YXN5_A0A0F4YXN5_TALEM_1408163 are exactly identical! WARNING: Sequences tr_B6Q3B1_B6Q3B1_TALMQ_441960 and tr_A0A0U1LNN0_A0A0U1LNN0_TALIS_28573 are exactly identical! WARNING: Sequences tr_B6Q3B1_B6Q3B1_TALMQ_441960 and tr_A0A1Q5Q794_A0A1Q5Q794_9EURO_1441469 are exactly identical! WARNING: Sequences tr_B6Q3B1_B6Q3B1_TALMQ_441960 and tr_A0A2H3HZY1_A0A2H3HZY1_9EURO_290292 are exactly identical! WARNING: Sequences tr_A7EX25_A7EX25_SCLS1_665079 and tr_G2Y0X4_G2Y0X4_BOTF4_999810 are exactly identical! WARNING: Sequences tr_A7EX25_A7EX25_SCLS1_665079 and tr_M7UVS8_M7UVS8_BOTF1_1290391 are exactly identical! WARNING: Sequences tr_A7EX25_A7EX25_SCLS1_665079 and tr_W9CFF0_W9CFF0_9HELO_1432307 are exactly identical! WARNING: Sequences tr_A7EX25_A7EX25_SCLS1_665079 and tr_A0A194XEV0_A0A194XEV0_9HELO_149040 are exactly identical! WARNING: Sequences tr_D8SQA8_D8SQA8_SELML_88036 and tr_D8SUM5_D8SUM5_SELML_88036 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_E9EW02_E9EW02_METRA_655844 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_E9DZD4_E9DZD4_METAQ_655827 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_J5JI30_J5JI30_BEAB2_655819 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_G9NME0_G9NME0_HYPAI_452589 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_G9MKM9_G9MKM9_HYPVG_413071 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_G0R6U6_G0R6U6_HYPJQ_431241 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A063BZZ1_A0A063BZZ1_9HYPO_1159556 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A0A2VVL1_A0A0A2VVL1_BEABA_1245745 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A0B2X125_A0A0B2X125_METAS_1081103 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A0B4IE86_A0A0B4IE86_METMF_1276143 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A0F9XP54_A0A0F9XP54_TRIHA_5544 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A0L0NL41_A0A0L0NL41_9HYPO_1163406 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A0A1TIQ8_A0A0A1TIQ8_9HYPO_1531966 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A0P7B4L8_A0A0P7B4L8_9HYPO_78410 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A0D9NZ18_A0A0D9NZ18_METAN_1291518 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A2P4ZV00_A0A2P4ZV00_9HYPO_398673 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A151GKS9_A0A151GKS9_9HYPO_98403 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A168E0I5_A0A168E0I5_9HYPO_1081104 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A166RZS2_A0A166RZS2_9HYPO_1081107 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A162L0C0_A0A162L0C0_CORDF_1081108 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A179H313_A0A179H313_9HYPO_33203 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A179G3S3_A0A179G3S3_METCM_1380566 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A2K3PZE5_A0A2K3PZE5_9HYPO_45235 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A2S4LBB5_A0A2S4LBB5_9HYPO_94208 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A2T3ZE46_A0A2T3ZE46_9HYPO_1042311 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A2T4CDA1_A0A2T4CDA1_TRILO_983965 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A2T4BD90_A0A2T4BD90_9HYPO_58853 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A2T4AHC3_A0A2T4AHC3_TRIHA_983964 are exactly identical! WARNING: Sequences tr_G3JJI3_G3JJI3_CORMM_983644 and tr_A0A167I4U8_A0A167I4U8_9HYPO_1081105 are exactly identical! WARNING: Sequences tr_C1G971_C1G971_PARBD_502780 and tr_C5FNZ1_C5FNZ1_ARTOC_554155 are exactly identical! WARNING: Sequences tr_C1G971_C1G971_PARBD_502780 and tr_C1GR77_C1GR77_PARBA_502779 are exactly identical! WARNING: Sequences tr_C1G971_C1G971_PARBD_502780 and tr_E4UP54_E4UP54_ARTGP_535722 are exactly identical! WARNING: Sequences tr_C1G971_C1G971_PARBD_502780 and tr_F2SJR8_F2SJR8_TRIRC_559305 are exactly identical! WARNING: Sequences tr_C1G971_C1G971_PARBD_502780 and tr_D4AL63_D4AL63_ARTBC_663331 are exactly identical! WARNING: Sequences tr_C1G971_C1G971_PARBD_502780 and tr_F2PNE5_F2PNE5_TRIEC_559882 are exactly identical! WARNING: Sequences tr_C1G971_C1G971_PARBD_502780 and tr_A0A059J8F2_A0A059J8F2_9EURO_1215338 are exactly identical! WARNING: Sequences tr_C1G971_C1G971_PARBD_502780 and tr_A0A2B7YEJ8_A0A2B7YEJ8_9EURO_1447875 are exactly identical! WARNING: Sequences tr_C1G971_C1G971_PARBD_502780 and tr_A0A2B7XUU0_A0A2B7XUU0_9EURO_1447883 are exactly identical! WARNING: Sequences tr_C1G971_C1G971_PARBD_502780 and tr_A0A178EQ58_A0A178EQ58_TRIRU_5551 are exactly identical! WARNING: Sequences tr_C0NCL5_C0NCL5_AJECG_447093 and tr_A0A179UPB7_A0A179UPB7_BLAGS_559298 are exactly identical! WARNING: Sequences tr_C0NCL5_C0NCL5_AJECG_447093 and tr_C5GF34_C5GF34_AJEDR_559297 are exactly identical! WARNING: Sequences tr_C0NCL5_C0NCL5_AJECG_447093 and tr_C6HJE7_C6HJE7_AJECH_544712 are exactly identical! WARNING: Sequences tr_C0NCL5_C0NCL5_AJECG_447093 and tr_F0UIE1_F0UIE1_AJEC8_544711 are exactly identical! WARNING: Sequences tr_C0NCL5_C0NCL5_AJECG_447093 and tr_A6R208_A6R208_AJECN_339724 are exactly identical! WARNING: Sequences tr_C0NCL5_C0NCL5_AJECG_447093 and tr_A0A1B7P9E7_A0A1B7P9E7_9EURO_1658172 are exactly identical! WARNING: Sequences tr_C0NCL5_C0NCL5_AJECG_447093 and tr_A0A1J9PBT8_A0A1J9PBT8_9EURO_1447872 are exactly identical! WARNING: Sequences tr_C0NCL5_C0NCL5_AJECG_447093 and tr_A0A2B7WWF3_A0A2B7WWF3_9EURO_2060905 are exactly identical! WARNING: Sequences tr_C0NCL5_C0NCL5_AJECG_447093 and tr_A0A2B7ZTE2_A0A2B7ZTE2_9EURO_73230 are exactly identical! WARNING: Sequences tr_C0NCL5_C0NCL5_AJECG_447093 and tr_A0A1J9QZW1_A0A1J9QZW1_9EURO_1658174 are exactly identical! WARNING: Sequences tr_Q7SDW4_Q7SDW4_NEUCR_367110 and tr_F7W1U3_F7W1U3_SORMK_771870 are exactly identical! WARNING: Sequences tr_Q7SDW4_Q7SDW4_NEUCR_367110 and tr_G4U679_G4U679_NEUT9_510952 are exactly identical! WARNING: Sequences tr_A0A072U2P0_A0A072U2P0_MEDTR_3880 and tr_A0A2K1YVZ0_A0A2K1YVZ0_POPTR_3694 are exactly identical! WARNING: Sequences tr_A0A072U2P0_A0A072U2P0_MEDTR_3880 and tr_A0A1S3E256_A0A1S3E256_CICAR_3827 are exactly identical! WARNING: Sequences tr_A0A072U2P0_A0A072U2P0_MEDTR_3880 and tr_A0A1R3FWF6_A0A1R3FWF6_COCAP_210143 are exactly identical! WARNING: Sequences tr_Q5KIW3_Q5KIW3_CRYNJ_214684 and tr_E6R3S5_E6R3S5_CRYGW_367775 are exactly identical! WARNING: Sequences tr_Q5KIW3_Q5KIW3_CRYNJ_214684 and tr_A0A095C1C8_A0A095C1C8_CRYGR_294750 are exactly identical! WARNING: Sequences tr_K7J034_K7J034_NASVI_7425 and tr_A0A088AW10_A0A088AW10_APIME_7460 are exactly identical! WARNING: Sequences tr_K7J034_K7J034_NASVI_7425 and tr_A0A158NJ26_A0A158NJ26_ATTCE_12957 are exactly identical! WARNING: Sequences tr_K7J034_K7J034_NASVI_7425 and tr_D6W9B8_D6W9B8_TRICA_7070 are exactly identical! WARNING: Sequences tr_K7J034_K7J034_NASVI_7425 and tr_F4WWN9_F4WWN9_ACREC_103372 are exactly identical! WARNING: Sequences tr_K7J034_K7J034_NASVI_7425 and tr_E2BGG1_E2BGG1_HARSA_610380 are exactly identical! WARNING: Sequences tr_K7J034_K7J034_NASVI_7425 and tr_T1HNH9_T1HNH9_RHOPR_13249 are exactly identical! WARNING: Sequences tr_K7J034_K7J034_NASVI_7425 and tr_A0A067R386_A0A067R386_ZOONE_136037 are exactly identical! WARNING: Sequences tr_K7J034_K7J034_NASVI_7425 and tr_A0A026WN57_A0A026WN57_OOCBI_2015173 are exactly identical! WARNING: Sequences tr_K7J034_K7J034_NASVI_7425 and tr_A0A151WL71_A0A151WL71_9HYME_64791 are exactly identical! WARNING: Sequences tr_K7J034_K7J034_NASVI_7425 and tr_A0A154PEP5_A0A154PEP5_9HYME_178035 are exactly identical! WARNING: Sequences tr_K7J034_K7J034_NASVI_7425 and tr_A0A151JNE4_A0A151JNE4_9HYME_471704 are exactly identical! WARNING: Sequences tr_K7J034_K7J034_NASVI_7425 and tr_A0A195BLB3_A0A195BLB3_9HYME_520822 are exactly identical! WARNING: Sequences tr_K7J034_K7J034_NASVI_7425 and tr_A0A195EY40_A0A195EY40_9HYME_34720 are exactly identical! WARNING: Sequences tr_K7J034_K7J034_NASVI_7425 and tr_A0A195C316_A0A195C316_9HYME_456900 are exactly identical! WARNING: Sequences tr_K7J034_K7J034_NASVI_7425 and tr_A0A3Q0J1Q9_A0A3Q0J1Q9_DIACI_121845 are exactly identical! WARNING: Sequences tr_K7J034_K7J034_NASVI_7425 and tr_A0A1W4WN64_A0A1W4WN64_AGRPL_224129 are exactly identical! WARNING: Sequences tr_K7J034_K7J034_NASVI_7425 and tr_A0A2J7QHF9_A0A2J7QHF9_9NEOP_105785 are exactly identical! WARNING: Sequences tr_K7J034_K7J034_NASVI_7425 and tr_A0A2A3E2T5_A0A2A3E2T5_APICC_94128 are exactly identical! WARNING: Sequences tr_K7J034_K7J034_NASVI_7425 and tr_A0A2P8ZB60_A0A2P8ZB60_BLAGE_6973 are exactly identical! WARNING: Sequences tr_F9G4A5_F9G4A5_FUSOF_660025 and tr_C7YH93_C7YH93_NECH7_660122 are exactly identical! WARNING: Sequences tr_F9G4A5_F9G4A5_FUSOF_660025 and tr_A0A0D2X9I3_A0A0D2X9I3_FUSO4_426428 are exactly identical! WARNING: Sequences tr_F9G4A5_F9G4A5_FUSOF_660025 and tr_N4TCR8_N4TCR8_FUSC1_1229664 are exactly identical! WARNING: Sequences tr_F9G4A5_F9G4A5_FUSOF_660025 and tr_X0C2G8_X0C2G8_FUSOX_1089458 are exactly identical! WARNING: Sequences tr_F9G4A5_F9G4A5_FUSOF_660025 and tr_A0A2H3STU1_A0A2H3STU1_FUSOX_5507 are exactly identical! WARNING: Sequences tr_F9G4A5_F9G4A5_FUSOF_660025 and tr_A0A2H3HTV1_A0A2H3HTV1_FUSOX_327505 are exactly identical! WARNING: Sequences tr_K4AY62_K4AY62_SOLLC_4081 and tr_M1CD94_M1CD94_SOLTU_4113 are exactly identical! WARNING: Sequences tr_K4D5D4_K4D5D4_SOLLC_4081 and tr_A0A059D326_A0A059D326_EUCGR_71139 are exactly identical! WARNING: Sequences tr_K4D5D4_K4D5D4_SOLLC_4081 and tr_A0A1S4CCR3_A0A1S4CCR3_TOBAC_4097 are exactly identical! WARNING: Sequences tr_K1QA72_K1QA72_CRAGI_29159 and tr_V3ZQP8_V3ZQP8_LOTGI_225164 are exactly identical! WARNING: Sequences tr_K1QA72_K1QA72_CRAGI_29159 and tr_A0A0L8IAQ8_A0A0L8IAQ8_OCTBM_37653 are exactly identical! WARNING: Sequences tr_K1QA72_K1QA72_CRAGI_29159 and tr_A0A210PER9_A0A210PER9_MIZYE_6573 are exactly identical! WARNING: Sequences tr_J3NXQ5_J3NXQ5_GAGT3_644352 and tr_A0A0C4DVP4_A0A0C4DVP4_MAGP6_644358 are exactly identical! WARNING: Sequences sp_Q8W1Y0_SSC14_ARATH_3702 and tr_D7M830_D7M830_ARALL_81972 are exactly identical! WARNING: Sequences sp_Q8W1Y0_SSC14_ARATH_3702 and tr_R0FDD9_R0FDD9_9BRAS_81985 are exactly identical! WARNING: Sequences sp_Q8W1Y0_SSC14_ARATH_3702 and tr_V4LGT6_V4LGT6_EUTSA_72664 are exactly identical! WARNING: Sequences tr_A0A0E0I9F8_A0A0E0I9F8_ORYNI_4536 and tr_A2YT76_A2YT76_ORYSI_39946 are exactly identical! WARNING: Sequences tr_A0A0E0I9F8_A0A0E0I9F8_ORYNI_4536 and tr_I1QH04_I1QH04_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A0A0E0I9F8_A0A0E0I9F8_ORYNI_4536 and tr_A0A0E0QGJ6_A0A0E0QGJ6_ORYRU_4529 are exactly identical! WARNING: Sequences tr_A0A0E0I9F8_A0A0E0I9F8_ORYNI_4536 and tr_A0A0D3GY60_A0A0D3GY60_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_A0A0E0I9F8_A0A0E0I9F8_ORYNI_4536 and tr_A0A0E0AT06_A0A0E0AT06_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_A0A0E0I9F8_A0A0E0I9F8_ORYNI_4536 and tr_A0A0E0LT20_A0A0E0LT20_ORYPU_4537 are exactly identical! WARNING: Sequences tr_A0A0E0I9F8_A0A0E0I9F8_ORYNI_4536 and tr_A0A0D9X618_A0A0D9X618_9ORYZ_77586 are exactly identical! WARNING: Sequences tr_A0A0E0I9F8_A0A0E0I9F8_ORYNI_4536 and tr_Q6YTK0_Q6YTK0_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_D0NDK6_D0NDK6_PHYIT_403677 and tr_A0A329RTZ7_A0A329RTZ7_9STRA_29920 are exactly identical! WARNING: Sequences tr_A0A0H5S3U0_A0A0H5S3U0_BRUMA_6279 and tr_A0A044ST93_A0A044ST93_ONCVO_6282 are exactly identical! WARNING: Sequences tr_A0A0H5S3U0_A0A0H5S3U0_BRUMA_6279 and tr_A0A0N4TP44_A0A0N4TP44_BRUPA_6280 are exactly identical! WARNING: Sequences tr_A0A0H5S3U0_A0A0H5S3U0_BRUMA_6279 and tr_A0A0R3RS74_A0A0R3RS74_9BILA_1147741 are exactly identical! WARNING: Sequences tr_A0A0H5S3U0_A0A0H5S3U0_BRUMA_6279 and tr_A0A183HHU1_A0A183HHU1_9BILA_387005 are exactly identical! WARNING: Sequences tr_A0A0H5S3U0_A0A0H5S3U0_BRUMA_6279 and tr_A0A182ELV3_A0A182ELV3_ONCOC_42157 are exactly identical! WARNING: Sequences tr_A0A0H5S3U0_A0A0H5S3U0_BRUMA_6279 and tr_A0A1I7W2U7_A0A1I7W2U7_LOALO_7209 are exactly identical! WARNING: Sequences tr_A1C600_A1C600_ASPCL_344612 and tr_A0A017SA97_A0A017SA97_9EURO_1388766 are exactly identical! WARNING: Sequences tr_A1C600_A1C600_ASPCL_344612 and tr_A0A1E3B4M7_A0A1E3B4M7_9EURO_573508 are exactly identical! WARNING: Sequences tr_A1C600_A1C600_ASPCL_344612 and tr_A0A1L9VVZ4_A0A1L9VVZ4_ASPGL_1160497 are exactly identical! WARNING: Sequences tr_K1XIZ3_K1XIZ3_MARBU_1072389 and tr_A0A0C3DRM9_A0A0C3DRM9_9PEZI_913774 are exactly identical! WARNING: Sequences tr_K1XIZ3_K1XIZ3_MARBU_1072389 and tr_A0A1E1KA34_A0A1E1KA34_9HELO_914237 are exactly identical! WARNING: Sequences tr_K1XIZ3_K1XIZ3_MARBU_1072389 and tr_A0A1L7WC56_A0A1L7WC56_9HELO_576137 are exactly identical! WARNING: Sequences tr_K1XIZ3_K1XIZ3_MARBU_1072389 and tr_A0A2S7PWP8_A0A2S7PWP8_9HELO_2070414 are exactly identical! WARNING: Sequences tr_K1XIZ3_K1XIZ3_MARBU_1072389 and tr_A0A2S7PMP2_A0A2S7PMP2_9HELO_2070412 are exactly identical! WARNING: Sequences tr_K1XIZ3_K1XIZ3_MARBU_1072389 and tr_A0A2T3B823_A0A2T3B823_AMORE_857342 are exactly identical! WARNING: Sequences tr_K1XIZ3_K1XIZ3_MARBU_1072389 and tr_A0A2V1B9A7_A0A2V1B9A7_9HELO_1485229 are exactly identical! WARNING: Sequences tr_E5SKM9_E5SKM9_TRISP_6334 and tr_A0A0V0S254_A0A0V0S254_9BILA_6336 are exactly identical! WARNING: Sequences tr_E5SKM9_E5SKM9_TRISP_6334 and tr_A0A0V1DCU1_A0A0V1DCU1_TRIBR_45882 are exactly identical! WARNING: Sequences tr_E5SKM9_E5SKM9_TRISP_6334 and tr_A0A0V0X3P8_A0A0V0X3P8_9BILA_92179 are exactly identical! WARNING: Sequences tr_E5SKM9_E5SKM9_TRISP_6334 and tr_A0A0V0VTR8_A0A0V0VTR8_9BILA_181606 are exactly identical! WARNING: Sequences tr_E5SKM9_E5SKM9_TRISP_6334 and tr_A0A0V1LE09_A0A0V1LE09_9BILA_6335 are exactly identical! WARNING: Sequences tr_E5SKM9_E5SKM9_TRISP_6334 and tr_A0A0V1A835_A0A0V1A835_9BILA_990121 are exactly identical! WARNING: Sequences tr_E5SKM9_E5SKM9_TRISP_6334 and tr_A0A0V0XKG4_A0A0V0XKG4_TRIPS_6337 are exactly identical! WARNING: Sequences tr_E5SKM9_E5SKM9_TRISP_6334 and tr_A0A0V1MQE9_A0A0V1MQE9_9BILA_268474 are exactly identical! WARNING: Sequences tr_E5SKM9_E5SKM9_TRISP_6334 and tr_A0A0V1PMX7_A0A0V1PMX7_9BILA_92180 are exactly identical! WARNING: Sequences tr_E5SKM9_E5SKM9_TRISP_6334 and tr_A0A0V1HR50_A0A0V1HR50_9BILA_268475 are exactly identical! WARNING: Sequences tr_E5SKM9_E5SKM9_TRISP_6334 and tr_A0A0V0U4I5_A0A0V0U4I5_9BILA_144512 are exactly identical! WARNING: Sequences tr_K2SLV6_K2SLV6_MACPH_1126212 and tr_A0A1J9QW25_A0A1J9QW25_9PEZI_236234 are exactly identical! WARNING: Sequences tr_A0A212FN93_A0A212FN93_DANPL_278856 and tr_A0A0L7LHW7_A0A0L7LHW7_9NEOP_104452 are exactly identical! WARNING: Sequences tr_H1VA05_H1VA05_COLHI_759273 and tr_E3Q610_E3Q610_COLGM_645133 are exactly identical! WARNING: Sequences tr_H1VA05_H1VA05_COLHI_759273 and tr_L2G280_L2G280_COLFN_1213859 are exactly identical! WARNING: Sequences tr_H1VA05_H1VA05_COLHI_759273 and tr_N4V3H7_N4V3H7_COLOR_1213857 are exactly identical! WARNING: Sequences tr_H1VA05_H1VA05_COLHI_759273 and tr_T0KH63_T0KH63_COLGC_1237896 are exactly identical! WARNING: Sequences tr_H1VA05_H1VA05_COLHI_759273 and tr_A0A010QRD6_A0A010QRD6_9PEZI_1445577 are exactly identical! WARNING: Sequences tr_H1VA05_H1VA05_COLHI_759273 and tr_A0A066X717_A0A066X717_COLSU_1173701 are exactly identical! WARNING: Sequences tr_H1VA05_H1VA05_COLHI_759273 and tr_A0A135V475_A0A135V475_9PEZI_1209931 are exactly identical! WARNING: Sequences tr_H1VA05_H1VA05_COLHI_759273 and tr_A0A166UXR1_A0A166UXR1_9PEZI_708197 are exactly identical! WARNING: Sequences tr_H1VA05_H1VA05_COLHI_759273 and tr_A0A167C985_A0A167C985_9PEZI_1573173 are exactly identical! WARNING: Sequences tr_H1VA05_H1VA05_COLHI_759273 and tr_A0A1G4B396_A0A1G4B396_9PEZI_1209926 are exactly identical! WARNING: Sequences tr_H1VA05_H1VA05_COLHI_759273 and tr_A0A1Q8RVW5_A0A1Q8RVW5_9PEZI_708187 are exactly identical! WARNING: Sequences tr_F4P0A4_F4P0A4_BATDJ_684364 and tr_A0A177WEL3_A0A177WEL3_BATDE_403673 are exactly identical! WARNING: Sequences tr_F0XR75_F0XR75_GROCL_655863 and tr_S3C4P2_S3C4P2_OPHP1_1262450 are exactly identical! WARNING: Sequences tr_F0XR75_F0XR75_GROCL_655863 and tr_U7PZ82_U7PZ82_SPOS1_1391915 are exactly identical! WARNING: Sequences tr_F0XR75_F0XR75_GROCL_655863 and tr_A0A167TVF8_A0A167TVF8_9PEZI_1081102 are exactly identical! WARNING: Sequences tr_J9K625_J9K625_ACYPI_7029 and tr_E0VE12_E0VE12_PEDHC_121224 are exactly identical! WARNING: Sequences tr_F9XDG8_F9XDG8_ZYMTI_336722 and tr_A0A1X7RWJ1_A0A1X7RWJ1_ZYMTR_1276538 are exactly identical! WARNING: Sequences tr_G0N748_G0N748_CAEBE_135651 and tr_G0P855_G0P855_CAEBE_135651 are exactly identical! WARNING: Sequences tr_A8WX65_A8WX65_CAEBR_6238 and tr_A0A1I7T3P8_A0A1I7T3P8_9PELO_1561998 are exactly identical! WARNING: Sequences tr_A8WX65_A8WX65_CAEBR_6238 and tr_A0A260ZQH6_A0A260ZQH6_9PELO_1503980 are exactly identical! WARNING: Sequences tr_A8WX65_A8WX65_CAEBR_6238 and tr_A0A260ZRF9_A0A260ZRF9_9PELO_1503980 are exactly identical! WARNING: Sequences tr_A8WX65_A8WX65_CAEBR_6238 and tr_A0A2G5UZS6_A0A2G5UZS6_9PELO_1611254 are exactly identical! WARNING: Sequences tr_I1HU85_I1HU85_BRADI_15368 and tr_A0A287M713_A0A287M713_HORVV_112509 are exactly identical! WARNING: Sequences tr_I1HU85_I1HU85_BRADI_15368 and tr_M7ZVB4_M7ZVB4_TRIUA_4572 are exactly identical! WARNING: Sequences tr_I1HU85_I1HU85_BRADI_15368 and tr_A0A3B6EMM9_A0A3B6EMM9_WHEAT_4565 are exactly identical! WARNING: Sequences tr_I1HU85_I1HU85_BRADI_15368 and tr_A0A3B6FTG9_A0A3B6FTG9_WHEAT_4565 are exactly identical! WARNING: Sequences tr_I1HU85_I1HU85_BRADI_15368 and tr_A0A3B6H2N0_A0A3B6H2N0_WHEAT_4565 are exactly identical! WARNING: Sequences sp_D2HSB3_RD21L_AILME_9646 and tr_G1M6G0_G1M6G0_AILME_9646 are exactly identical! WARNING: Sequences sp_D2HSB3_RD21L_AILME_9646 and tr_A0A384D3B2_A0A384D3B2_URSMA_29073 are exactly identical! WARNING: Sequences tr_B3S1Y0_B3S1Y0_TRIAD_10228 and tr_B3S291_B3S291_TRIAD_10228 are exactly identical! WARNING: Sequences tr_B3S1Y0_B3S1Y0_TRIAD_10228 and tr_A0A369SFF5_A0A369SFF5_9METZ_287889 are exactly identical! WARNING: Sequences tr_W7LCR6_W7LCR6_GIBM7_334819 and tr_S0DIU3_S0DIU3_GIBF5_1279085 are exactly identical! WARNING: Sequences tr_W7LCR6_W7LCR6_GIBM7_334819 and tr_A0A2K0W4Z3_A0A2K0W4Z3_GIBNY_42673 are exactly identical! WARNING: Sequences tr_W7LCR6_W7LCR6_GIBM7_334819 and tr_A0A365N684_A0A365N684_GIBIN_948311 are exactly identical! WARNING: Sequences tr_L0P7D0_L0P7D0_PNEJ8_1209962 and tr_A0A0W4ZRZ4_A0A0W4ZRZ4_PNEJ7_1408657 are exactly identical! WARNING: Sequences tr_L8FQX8_L8FQX8_PSED2_658429 and tr_A0A094CB48_A0A094CB48_9PEZI_1420910 are exactly identical! WARNING: Sequences tr_L8FQX8_L8FQX8_PSED2_658429 and tr_A0A094EEF9_A0A094EEF9_9PEZI_1420912 are exactly identical! WARNING: Sequences tr_L8FQX8_L8FQX8_PSED2_658429 and tr_A0A1B8DRI6_A0A1B8DRI6_9PEZI_1524831 are exactly identical! WARNING: Sequences tr_L8FQX8_L8FQX8_PSED2_658429 and tr_A0A1B8GB50_A0A1B8GB50_9PEZI_342668 are exactly identical! WARNING: Sequences tr_L8FQX8_L8FQX8_PSED2_658429 and tr_A0A1B8CDV6_A0A1B8CDV6_9PEZI_1622147 are exactly identical! WARNING: Sequences tr_L8FQX8_L8FQX8_PSED2_658429 and tr_A0A1B8F3K6_A0A1B8F3K6_9PEZI_1622149 are exactly identical! WARNING: Sequences tr_M4CQ57_M4CQ57_BRARP_51351 and tr_M4CWN1_M4CWN1_BRARP_51351 are exactly identical! WARNING: Sequences tr_M4CQ57_M4CQ57_BRARP_51351 and tr_A0A078J104_A0A078J104_BRANA_3708 are exactly identical! WARNING: Sequences tr_M4CQ57_M4CQ57_BRARP_51351 and tr_A0A0D3B1G0_A0A0D3B1G0_BRAOL_109376 are exactly identical! WARNING: Sequences tr_M4CQ57_M4CQ57_BRARP_51351 and tr_A0A0D3EF30_A0A0D3EF30_BRAOL_109376 are exactly identical! WARNING: Sequences tr_M0TE80_M0TE80_MUSAM_214687 and tr_U5DDI8_U5DDI8_AMBTC_13333 are exactly identical! WARNING: Sequences tr_M0TE80_M0TE80_MUSAM_214687 and tr_A0A2H3XSN0_A0A2H3XSN0_PHODC_42345 are exactly identical! WARNING: Sequences tr_M0TE80_M0TE80_MUSAM_214687 and tr_A0A2H3Z1V4_A0A2H3Z1V4_PHODC_42345 are exactly identical! WARNING: Sequences tr_N4U6K1_N4U6K1_FUSC1_1229664 and tr_X0BED1_X0BED1_FUSOX_1089458 are exactly identical! WARNING: Sequences tr_N4U6K1_N4U6K1_FUSC1_1229664 and tr_A0A2H3U013_A0A2H3U013_FUSOX_5507 are exactly identical! WARNING: Sequences tr_M2ZQV5_M2ZQV5_PSEFD_383855 and tr_A0A139HDU5_A0A139HDU5_9PEZI_321146 are exactly identical! WARNING: Sequences tr_U5HBK5_U5HBK5_USTV1_683840 and tr_A0A238FCF3_A0A238FCF3_9BASI_269621 are exactly identical! WARNING: Sequences tr_U5HBK5_U5HBK5_USTV1_683840 and tr_A0A2X0LY56_A0A2X0LY56_9BASI_796604 are exactly identical! WARNING: Sequences tr_U5HBK5_U5HBK5_USTV1_683840 and tr_A0A2X0KW47_A0A2X0KW47_9BASI_289078 are exactly identical! WARNING: Sequences tr_W9VNV0_W9VNV0_9EURO_1182544 and tr_A0A1C1CD74_A0A1C1CD74_9EURO_86049 are exactly identical! WARNING: Sequences tr_W9YQA7_W9YQA7_9EURO_1182541 and tr_A0A0D1Z5N2_A0A0D1Z5N2_9EURO_1016849 are exactly identical! WARNING: Sequences tr_W9YQA7_W9YQA7_9EURO_1182541 and tr_A0A0D2IK35_A0A0D2IK35_9EURO_1442369 are exactly identical! WARNING: Sequences tr_A0A015KG06_A0A015KG06_9GLOM_1432141 and tr_A0A2I1FST9_A0A2I1FST9_9GLOM_588596 are exactly identical! WARNING: Sequences tr_A0A015KG06_A0A015KG06_9GLOM_1432141 and tr_A0A2H5U7Y0_A0A2H5U7Y0_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A067GUT3_A0A067GUT3_CITSI_2711 and tr_V4VI61_V4VI61_9ROSI_85681 are exactly identical! WARNING: Sequences tr_A0A067GUT3_A0A067GUT3_CITSI_2711 and tr_A0A2H5N9Z0_A0A2H5N9Z0_CITUN_55188 are exactly identical! WARNING: Sequences tr_A0A074SCH3_A0A074SCH3_9HOMO_1423351 and tr_A0A0K6FK73_A0A0K6FK73_9HOMO_456999 are exactly identical! WARNING: Sequences tr_A0A074WAH7_A0A074WAH7_9PEZI_1043004 and tr_A0A074ZLU6_A0A074ZLU6_9PEZI_1043005 are exactly identical! WARNING: Sequences tr_A0A074WAH7_A0A074WAH7_9PEZI_1043004 and tr_A0A074VEV9_A0A074VEV9_9PEZI_1043003 are exactly identical! WARNING: Sequences tr_A0A074WAH7_A0A074WAH7_9PEZI_1043004 and tr_A0A074Y1Y9_A0A074Y1Y9_AURPU_1043002 are exactly identical! WARNING: Sequences tr_A0A078HLC7_A0A078HLC7_BRANA_3708 and tr_A0A0D3AJB8_A0A0D3AJB8_BRAOL_109376 are exactly identical! WARNING: Sequences tr_M5G6G9_M5G6G9_DACPD_1858805 and tr_A0A167PM26_A0A167PM26_9BASI_1330018 are exactly identical! WARNING: Sequences tr_M5G6G9_M5G6G9_DACPD_1858805 and tr_A0A165G948_A0A165G948_9BASI_1353952 are exactly identical! WARNING: Sequences tr_S7QC84_S7QC84_GLOTA_670483 and tr_A0A165PQJ3_A0A165PQJ3_9HOMO_1314782 are exactly identical! WARNING: Sequences tr_A0A067C2F6_A0A067C2F6_SAPPC_695850 and tr_T0RNM4_T0RNM4_9STRA_1156394 are exactly identical! WARNING: Sequences tr_A0A0D2P690_A0A0D2P690_GOSRA_29730 and tr_A0A1U8KNC1_A0A1U8KNC1_GOSHI_3635 are exactly identical! WARNING: Sequences tr_A0A0D2P690_A0A0D2P690_GOSRA_29730 and tr_A0A1U8LCW8_A0A1U8LCW8_GOSHI_3635 are exactly identical! WARNING: Sequences tr_A0A0G2FF15_A0A0G2FF15_9PEZI_1214573 and tr_A0A194VQU6_A0A194VQU6_9PEZI_105487 are exactly identical! WARNING: Sequences tr_A0A0G2FF15_A0A0G2FF15_9PEZI_1214573 and tr_A0A194VCK9_A0A194VCK9_9PEZI_694573 are exactly identical! WARNING: Sequences tr_A0A0G2FF15_A0A0G2FF15_9PEZI_1214573 and tr_A0A2P5HSD2_A0A2P5HSD2_9PEZI_158607 are exactly identical! WARNING: Sequences tr_A0A0K0FLP5_A0A0K0FLP5_STRVS_75913 and tr_A0A0N5CDG4_A0A0N5CDG4_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A2A9PG48_A0A2A9PG48_9HYPO_268505 and tr_A0A2C5XIY8_A0A2C5XIY8_9HYPO_2004952 are exactly identical! WARNING: Sequences tr_A0A2A9PG48_A0A2A9PG48_9HYPO_268505 and tr_A0A369GZ58_A0A369GZ58_9HYPO_2039875 are exactly identical! WARNING: Sequences tr_A0A2A9PG48_A0A2A9PG48_9HYPO_268505 and tr_A0A369GW34_A0A369GW34_9HYPO_2039874 are exactly identical! WARNING: Sequences tr_A0A2A9PG48_A0A2A9PG48_9HYPO_268505 and tr_A0A367LJM0_A0A367LJM0_9HYPO_1330021 are exactly identical! WARNING: Sequences tr_A0A0N0DEE3_A0A0N0DEE3_FUSLA_179993 and tr_A0A1B8B1G5_A0A1B8B1G5_FUSPO_36050 are exactly identical! WARNING: Sequences tr_A0A0N0DEE3_A0A0N0DEE3_FUSLA_179993 and tr_A0A2L2T3N6_A0A2L2T3N6_9HYPO_56646 are exactly identical! WARNING: Sequences tr_A0A0N0DEE3_A0A0N0DEE3_FUSLA_179993 and tr_A0A366RWF1_A0A366RWF1_9HYPO_2109339 are exactly identical! WARNING: Sequences tr_A0A0A1NG80_A0A0A1NG80_9FUNG_58291 and tr_A0A0A1P5E1_A0A0A1P5E1_9FUNG_58291 are exactly identical! WARNING: Sequences tr_A0A0A1NG80_A0A0A1NG80_9FUNG_58291 and tr_A0A2G4T973_A0A2G4T973_9FUNG_1340429 are exactly identical! WARNING: Sequences tr_A0A0A1NG80_A0A0A1NG80_9FUNG_58291 and tr_A0A367K8D8_A0A367K8D8_9FUNG_86630 are exactly identical! WARNING: Sequences tr_A0A0G4MPB5_A0A0G4MPB5_9PEZI_100787 and tr_A0A0G4MV23_A0A0G4MV23_9PEZI_100787 are exactly identical! WARNING: Sequences tr_A0A0R3WZF5_A0A0R3WZF5_HYDTA_6205 and tr_A0A0R3W8J9_A0A0R3W8J9_TAEAS_60517 are exactly identical! WARNING: Sequences tr_A0A151P1G1_A0A151P1G1_ALLMI_8496 and tr_A0A3Q0HC47_A0A3Q0HC47_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A091VU92_A0A091VU92_NIPNI_128390 and tr_A0A091WBE1_A0A091WBE1_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A087R8P6_A0A087R8P6_APTFO_9233 and tr_A0A2I0M5W3_A0A2I0M5W3_COLLI_8932 are exactly identical! WARNING: Sequences tr_A0A087R8P6_A0A087R8P6_APTFO_9233 and tr_A0A1V4KKJ1_A0A1V4KKJ1_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A0C3CMN3_A0A0C3CMN3_HEBCY_686832 and tr_A0A0D2MY97_A0A0D2MY97_9AGAR_945553 are exactly identical! WARNING: Sequences tr_A0A0C3A7Y3_A0A0C3A7Y3_9HOMO_1036808 and tr_A0A0D0A6M9_A0A0D0A6M9_9HOMO_765257 are exactly identical! WARNING: Sequences tr_A0A0C3A7Y3_A0A0C3A7Y3_9HOMO_1036808 and tr_A0A0C3FV94_A0A0C3FV94_9HOMO_765440 are exactly identical! WARNING: Sequences tr_A0A0C3A7Y3_A0A0C3A7Y3_9HOMO_1036808 and tr_A0A0C3KKQ0_A0A0C3KKQ0_PISTI_870435 are exactly identical! WARNING: Sequences tr_A0A0C3A7Y3_A0A0C3A7Y3_9HOMO_1036808 and tr_A0A0D0BFI9_A0A0D0BFI9_9HOMO_930992 are exactly identical! WARNING: Sequences tr_A0A0C3A7Y3_A0A0C3A7Y3_9HOMO_1036808 and tr_A0A166AHY1_A0A166AHY1_9HOMO_436010 are exactly identical! WARNING: Sequences tr_A0A0C3A7Y3_A0A0C3A7Y3_9HOMO_1036808 and tr_A0A165N1Q8_A0A165N1Q8_9APHY_1314783 are exactly identical! WARNING: Sequences tr_A0A0C3A7Y3_A0A0C3A7Y3_9HOMO_1036808 and tr_A0A1B7N5H0_A0A1B7N5H0_9HOMO_1314800 are exactly identical! WARNING: Sequences tr_A0A0C3A7Y3_A0A0C3A7Y3_9HOMO_1036808 and tr_A0A1J8QDA0_A0A1J8QDA0_9HOMO_180088 are exactly identical! WARNING: Sequences tr_A0A087UMP1_A0A087UMP1_9ARAC_407821 and tr_A0A1V9XC91_A0A1V9XC91_9ACAR_418985 are exactly identical! WARNING: Sequences tr_A0A1S7UJG5_A0A1S7UJG5_ROSNE_77044 and tr_A0A1V1TGM9_A0A1V1TGM9_9FUNG_1813822 are exactly identical! WARNING: Sequences tr_A0A0P1BCW1_A0A0P1BCW1_9BASI_401625 and tr_A0A316VQU9_A0A316VQU9_9BASI_1522189 are exactly identical! WARNING: Sequences tr_A0A136ILY4_A0A136ILY4_9PEZI_196109 and tr_A0A1Y2UUP3_A0A1Y2UUP3_9PEZI_1001938 are exactly identical! WARNING: Sequences tr_A0A136ILY4_A0A136ILY4_9PEZI_196109 and tr_A0A1Y2VXQ0_A0A1Y2VXQ0_9PEZI_1001833 are exactly identical! WARNING: Sequences tr_A0A136ILY4_A0A136ILY4_9PEZI_196109 and tr_A0A1Y2WXE5_A0A1Y2WXE5_9PEZI_1001832 are exactly identical! WARNING: Sequences tr_A0A164NU70_A0A164NU70_9HOMO_1314777 and tr_A0A165YDQ8_A0A165YDQ8_9HOMO_1314776 are exactly identical! WARNING: Sequences tr_A0A1A6ACY1_A0A1A6ACY1_9TREE_1296121 and tr_A0A1B9HWA5_A0A1B9HWA5_9TREE_1296096 are exactly identical! WARNING: Sequences tr_A0A1S3X266_A0A1S3X266_TOBAC_4097 and tr_A0A314LAD0_A0A314LAD0_NICAT_49451 are exactly identical! WARNING: Sequences tr_A0A1S3X266_A0A1S3X266_TOBAC_4097 and tr_A0A1U7WG28_A0A1U7WG28_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S3MKK1_A0A1S3MKK1_SALSA_8030 and tr_A0A1S3Q0V6_A0A1S3Q0V6_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3MKK1_A0A1S3MKK1_SALSA_8030 and tr_B5X3C3_B5X3C3_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3MKK1_A0A1S3MKK1_SALSA_8030 and tr_A0A060YEQ0_A0A060YEQ0_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3MKK1_A0A1S3MKK1_SALSA_8030 and tr_A0A060YHJ8_A0A060YHJ8_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A0M3QTM1_A0A0M3QTM1_DROBS_30019 and tr_A0A0M4EQX2_A0A0M4EQX2_DROBS_30019 are exactly identical! WARNING: Sequences tr_A0A1B9IU90_A0A1B9IU90_9TREE_1331196 and tr_A0A1B9H2V2_A0A1B9H2V2_9TREE_1296120 are exactly identical! WARNING: Sequences tr_A0A1B9IU90_A0A1B9IU90_9TREE_1331196 and tr_A0A1B9G5Y4_A0A1B9G5Y4_9TREE_1296100 are exactly identical! WARNING: Sequences tr_A0A1R1XI90_A0A1R1XI90_9FUNG_133412 and tr_A0A1R1YD11_A0A1R1YD11_9FUNG_133412 are exactly identical! WARNING: Sequences tr_A0A1U7Z6I2_A0A1U7Z6I2_NELNU_4432 and tr_A0A1U7ZCS5_A0A1U7ZCS5_NELNU_4432 are exactly identical! WARNING: Sequences tr_A0A1V6TH00_A0A1V6TH00_9EURO_303698 and tr_A0A2I2F4I7_A0A2I2F4I7_9EURO_41067 are exactly identical! WARNING: Sequences tr_A0A1V6TH00_A0A1V6TH00_9EURO_303698 and tr_A0A2J5HK00_A0A2J5HK00_9EURO_482145 are exactly identical! WARNING: Sequences tr_A0A1V6TH00_A0A1V6TH00_9EURO_303698 and tr_A0A317W1I7_A0A317W1I7_9EURO_1448321 are exactly identical! WARNING: Sequences tr_A0A1V8TXK4_A0A1V8TXK4_9PEZI_1974281 and tr_A0A1V8SS52_A0A1V8SS52_9PEZI_1507870 are exactly identical! WARNING: Sequences tr_A0A1V8TXK4_A0A1V8TXK4_9PEZI_1974281 and tr_A0A1V8TJL7_A0A1V8TJL7_9PEZI_1507870 are exactly identical! WARNING: Sequences tr_A0A1Y1WPG6_A0A1Y1WPG6_9FUNG_1314790 and tr_A0A1Y1YWW1_A0A1Y1YWW1_9FUNG_1314790 are exactly identical! WARNING: Sequences tr_A0A1Y1VJ47_A0A1Y1VJ47_9FUNG_1754191 and tr_A0A1Y1Z687_A0A1Y1Z687_9FUNG_1754190 are exactly identical! WARNING: Sequences tr_A0A1Y1VJ47_A0A1Y1VJ47_9FUNG_1754191 and tr_A0A1Y1XQ79_A0A1Y1XQ79_9FUNG_1754192 are exactly identical! WARNING: Sequences tr_A0A1Z5SRH5_A0A1Z5SRH5_HORWE_1157616 and tr_A0A1Z5TU98_A0A1Z5TU98_HORWE_1157616 are exactly identical! WARNING: Sequences tr_A0A200QJH5_A0A200QJH5_9MAGN_56857 and tr_A0A2G5CE99_A0A2G5CE99_AQUCA_218851 are exactly identical! WARNING: Sequences tr_A0A226NKN4_A0A226NKN4_CALSU_9009 and tr_A0A226PFS9_A0A226PFS9_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A251SKB6_A0A251SKB6_HELAN_4232 and tr_A0A251UBY0_A0A251UBY0_HELAN_4232 are exactly identical! WARNING: Sequences tr_A0A2A2J3N5_A0A2A2J3N5_9BILA_2018661 and tr_A0A2A2JP92_A0A2A2JP92_9BILA_2018661 are exactly identical! WARNING: Sequences tr_A0A2H3F8J2_A0A2H3F8J2_9HELO_946125 and tr_A0A2H3FEA0_A0A2H3FEA0_9HELO_946125 are exactly identical! WARNING: Sequences tr_A0A2H3F8J2_A0A2H3F8J2_9HELO_946125 and tr_A0A218ZGH9_A0A218ZGH9_9HELO_503106 are exactly identical! WARNING: Sequences tr_A0A2H3F8J2_A0A2H3F8J2_9HELO_946125 and tr_A0A370T917_A0A370T917_9PEZI_2005443 are exactly identical! WARNING: Sequences tr_A0A2D0QWD0_A0A2D0QWD0_ICTPU_7998 and tr_A0A2D0QWD2_A0A2D0QWD2_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QWD0_A0A2D0QWD0_ICTPU_7998 and tr_A0A2D0QYA1_A0A2D0QYA1_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A1U8DRD0_A0A1U8DRD0_CAPAN_4072 and tr_A0A2G3DGK5_A0A2G3DGK5_CAPCH_80379 are exactly identical! WARNING: Sequences tr_A0A1U8ESX9_A0A1U8ESX9_CAPAN_4072 and tr_A0A2G3B0G2_A0A2G3B0G2_CAPCH_80379 are exactly identical! WARNING: Sequences tr_A0A2G5HTA0_A0A2G5HTA0_CERBT_122368 and tr_A0A2S6BVW1_A0A2S6BVW1_9PEZI_357750 are exactly identical! WARNING: Sequences tr_A0A2G8JIQ2_A0A2G8JIQ2_STIJA_307972 and tr_A0A2G8JUF8_A0A2G8JUF8_STIJA_307972 are exactly identical! WARNING: Sequences tr_A0A2J6TC86_A0A2J6TC86_9HELO_1095630 and tr_A0A2J6PPL3_A0A2J6PPL3_9HELO_1745343 are exactly identical! WARNING: Sequences tr_A0A2J6TC86_A0A2J6TC86_9HELO_1095630 and tr_A0A2J6R2N0_A0A2J6R2N0_9HELO_1149755 are exactly identical! WARNING: Sequences tr_A0A2R6QKV8_A0A2R6QKV8_ACTCH_1590841 and tr_A0A2R6RAA2_A0A2R6RAA2_ACTCH_1590841 are exactly identical! WARNING: Sequences tr_A0A118K5T5_A0A118K5T5_CYNCS_59895 and tr_A0A2U1P8J6_A0A2U1P8J6_ARTAN_35608 are exactly identical! WARNING: Sequences tr_A0A2T6ZNP2_A0A2T6ZNP2_TUBBO_42251 and tr_A0A317SSB0_A0A317SSB0_9PEZI_42249 are exactly identical! WARNING: Duplicate sequences found: 578 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/3_mltree/O60216.raxml.reduced.phy Alignment comprises 1 partitions and 56 patterns Partition 0: noname Model: LG4X+R4 Alignment sites / patterns: 56 / 56 Gaps: 0.85 % Invariant sites: 0.00 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/3_mltree/O60216.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 1 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Generating 20 random starting tree(s) with 994 taxa [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 56 / 4480 [00:00:00] Data distribution: max. searches per worker: 20 Starting ML tree search with 20 distinct starting trees [00:00:00 -58712.438593] Initial branch length optimization [00:00:01 -48897.492373] Model parameter optimization (eps = 10.000000) [00:00:19 -48866.823051] AUTODETECT spr round 1 (radius: 5) [00:01:35 -30070.218763] AUTODETECT spr round 2 (radius: 10) [00:02:54 -22325.751146] AUTODETECT spr round 3 (radius: 15) [00:04:22 -18204.804490] AUTODETECT spr round 4 (radius: 20) [00:06:00 -15849.435180] AUTODETECT spr round 5 (radius: 25) [00:07:39 -13906.824967] SPR radius for FAST iterations: 25 (autodetect) [00:07:39 -13906.824967] Model parameter optimization (eps = 3.000000) [00:07:51 -13892.341887] FAST spr round 1 (radius: 25) [00:09:17 -10717.078294] FAST spr round 2 (radius: 25) [00:10:32 -10324.412937] FAST spr round 3 (radius: 25) [00:11:45 -10281.429781] FAST spr round 4 (radius: 25) [00:12:56 -10280.615595] FAST spr round 5 (radius: 25) [00:14:05 -10280.615572] Model parameter optimization (eps = 1.000000) [00:14:14 -10279.080467] SLOW spr round 1 (radius: 5) [00:15:26 -10277.731537] SLOW spr round 2 (radius: 5) [00:16:37 -10277.730732] SLOW spr round 3 (radius: 10) [00:17:51 -10271.467912] SLOW spr round 4 (radius: 5) [00:19:10 -10270.796465] SLOW spr round 5 (radius: 5) [00:20:23 -10270.796233] SLOW spr round 6 (radius: 10) [00:21:41 -10270.621185] SLOW spr round 7 (radius: 5) [00:22:59 -10269.820444] SLOW spr round 8 (radius: 5) [00:24:11 -10269.820418] SLOW spr round 9 (radius: 10) [00:25:30 -10269.820353] SLOW spr round 10 (radius: 15) [00:27:06 -10263.138544] SLOW spr round 11 (radius: 5) [00:28:29 -10261.528280] SLOW spr round 12 (radius: 5) [00:29:46 -10260.632494] SLOW spr round 13 (radius: 5) [00:30:58 -10260.632466] SLOW spr round 14 (radius: 10) [00:32:15 -10258.901372] SLOW spr round 15 (radius: 5) [00:33:34 -10258.901336] SLOW spr round 16 (radius: 10) [00:34:51 -10242.441397] SLOW spr round 17 (radius: 5) [00:36:11 -10240.698696] SLOW spr round 18 (radius: 5) [00:37:23 -10240.698532] SLOW spr round 19 (radius: 10) [00:38:39 -10240.698487] SLOW spr round 20 (radius: 15) [00:40:08 -10240.254992] SLOW spr round 21 (radius: 5) [00:41:27 -10240.254886] SLOW spr round 22 (radius: 10) [00:42:44 -10240.254884] SLOW spr round 23 (radius: 15) [00:44:15 -10240.254864] SLOW spr round 24 (radius: 20) [00:46:03 -10240.254861] SLOW spr round 25 (radius: 25) [00:48:12 -10235.907484] SLOW spr round 26 (radius: 5) [00:49:37 -10231.215257] SLOW spr round 27 (radius: 5) [00:50:53 -10231.215218] SLOW spr round 28 (radius: 10) [00:52:08 -10231.215218] SLOW spr round 29 (radius: 15) [00:53:38 -10231.215218] SLOW spr round 30 (radius: 20) [00:55:23 -10231.215218] SLOW spr round 31 (radius: 25) [00:57:28 -10231.215218] Model parameter optimization (eps = 0.100000) [00:57:38] ML tree search #1, logLikelihood: -10231.143692 [00:57:38 -59143.035334] Initial branch length optimization [00:57:40 -48838.746986] Model parameter optimization (eps = 10.000000) [00:58:00 -48810.526091] AUTODETECT spr round 1 (radius: 5) [00:59:18 -30737.525375] AUTODETECT spr round 2 (radius: 10) [01:00:38 -22387.220465] AUTODETECT spr round 3 (radius: 15) [01:02:08 -16151.485244] AUTODETECT spr round 4 (radius: 20) [01:03:46 -14584.935581] AUTODETECT spr round 5 (radius: 25) [01:05:44 -14172.975182] SPR radius for FAST iterations: 25 (autodetect) [01:05:44 -14172.975182] Model parameter optimization (eps = 3.000000) [01:05:58 -14154.941781] FAST spr round 1 (radius: 25) [01:07:22 -11585.530782] FAST spr round 2 (radius: 25) [01:08:34 -10946.214005] FAST spr round 3 (radius: 25) [01:09:44 -10843.481381] FAST spr round 4 (radius: 25) [01:10:56 -10830.029654] FAST spr round 5 (radius: 25) [01:12:07 -10830.029080] Model parameter optimization (eps = 1.000000) [01:12:13 -10829.810263] SLOW spr round 1 (radius: 5) [01:13:26 -10827.339314] SLOW spr round 2 (radius: 5) [01:14:36 -10827.331546] SLOW spr round 3 (radius: 10) [01:15:53 -10801.836264] SLOW spr round 4 (radius: 5) [01:17:14 -10745.287329] SLOW spr round 5 (radius: 5) [01:18:29 -10744.961959] SLOW spr round 6 (radius: 5) [01:19:41 -10744.961880] SLOW spr round 7 (radius: 10) [01:20:56 -10744.763699] SLOW spr round 8 (radius: 5) [01:22:15 -10744.763677] SLOW spr round 9 (radius: 10) [01:23:35 -10731.087356] SLOW spr round 10 (radius: 5) [01:24:57 -10728.207548] SLOW spr round 11 (radius: 5) [01:26:10 -10728.203219] SLOW spr round 12 (radius: 10) [01:27:27 -10726.543355] SLOW spr round 13 (radius: 5) [01:28:46 -10726.543334] SLOW spr round 14 (radius: 10) [01:30:02 -10726.499907] SLOW spr round 15 (radius: 15) [01:31:33 -10691.496338] SLOW spr round 16 (radius: 5) [01:32:58 -10691.496300] SLOW spr round 17 (radius: 10) [01:34:18 -10691.496300] SLOW spr round 18 (radius: 15) [01:35:49 -10691.496300] SLOW spr round 19 (radius: 20) [01:37:47 -10547.534490] SLOW spr round 20 (radius: 5) [01:39:15 -10442.532975] SLOW spr round 21 (radius: 5) [01:40:35 -10383.397810] SLOW spr round 22 (radius: 5) [01:41:49 -10380.825101] SLOW spr round 23 (radius: 5) [01:43:04 -10377.715871] SLOW spr round 24 (radius: 5) [01:44:17 -10377.713031] SLOW spr round 25 (radius: 10) [01:45:33 -10372.823116] SLOW spr round 26 (radius: 5) [01:46:53 -10354.278875] SLOW spr round 27 (radius: 5) [01:48:06 -10348.555389] SLOW spr round 28 (radius: 5) [01:49:16 -10348.555388] SLOW spr round 29 (radius: 10) [01:50:33 -10348.555388] SLOW spr round 30 (radius: 15) [01:52:05 -10304.819180] SLOW spr round 31 (radius: 5) [01:53:27 -10270.927022] SLOW spr round 32 (radius: 5) [01:54:43 -10254.661090] SLOW spr round 33 (radius: 5) [01:55:56 -10252.873227] SLOW spr round 34 (radius: 5) [01:57:08 -10252.839771] SLOW spr round 35 (radius: 10) [01:58:23 -10252.755567] SLOW spr round 36 (radius: 15) [01:59:55 -10252.090379] SLOW spr round 37 (radius: 5) [02:01:17 -10252.089723] SLOW spr round 38 (radius: 10) [02:02:36 -10252.089126] SLOW spr round 39 (radius: 15) [02:04:07 -10252.088532] SLOW spr round 40 (radius: 20) [02:05:53 -10251.794823] SLOW spr round 41 (radius: 5) [02:07:17 -10251.723532] SLOW spr round 42 (radius: 10) [02:08:39 -10251.722929] SLOW spr round 43 (radius: 15) [02:10:08 -10251.722324] SLOW spr round 44 (radius: 20) [02:11:56 -10251.721717] SLOW spr round 45 (radius: 25) [02:14:04 -10250.037582] SLOW spr round 46 (radius: 5) [02:15:29 -10249.331979] SLOW spr round 47 (radius: 5) [02:16:47 -10249.331946] SLOW spr round 48 (radius: 10) [02:18:03 -10249.331946] SLOW spr round 49 (radius: 15) [02:19:34 -10249.331946] SLOW spr round 50 (radius: 20) [02:21:21 -10249.331946] SLOW spr round 51 (radius: 25) [02:23:27 -10249.331946] Model parameter optimization (eps = 0.100000) [02:23:35] ML tree search #2, logLikelihood: -10249.069799 [02:23:35 -59081.851749] Initial branch length optimization [02:23:36 -49059.487007] Model parameter optimization (eps = 10.000000) [02:23:53 -49028.621412] AUTODETECT spr round 1 (radius: 5) [02:25:10 -29890.460873] AUTODETECT spr round 2 (radius: 10) [02:26:30 -21121.522014] AUTODETECT spr round 3 (radius: 15) [02:28:00 -16258.531121] AUTODETECT spr round 4 (radius: 20) [02:29:34 -14080.735212] AUTODETECT spr round 5 (radius: 25) [02:31:13 -13152.802102] SPR radius for FAST iterations: 25 (autodetect) [02:31:13 -13152.802102] Model parameter optimization (eps = 3.000000) [02:31:28 -13136.022038] FAST spr round 1 (radius: 25) [02:32:52 -10561.215659] FAST spr round 2 (radius: 25) [02:34:06 -10396.410681] FAST spr round 3 (radius: 25) [02:35:18 -10375.205864] FAST spr round 4 (radius: 25) [02:36:30 -10375.150490] Model parameter optimization (eps = 1.000000) [02:36:37 -10373.603424] SLOW spr round 1 (radius: 5) [02:37:50 -10371.482228] SLOW spr round 2 (radius: 5) [02:39:03 -10369.680279] SLOW spr round 3 (radius: 5) [02:40:18 -10366.818328] SLOW spr round 4 (radius: 5) [02:41:30 -10366.818286] SLOW spr round 5 (radius: 10) [02:42:46 -10356.686212] SLOW spr round 6 (radius: 5) [02:44:06 -10352.188249] SLOW spr round 7 (radius: 5) [02:45:22 -10349.920132] SLOW spr round 8 (radius: 5) [02:46:34 -10349.897257] SLOW spr round 9 (radius: 10) [02:47:51 -10346.353283] SLOW spr round 10 (radius: 5) [02:49:10 -10346.334927] SLOW spr round 11 (radius: 10) [02:50:26 -10346.291658] SLOW spr round 12 (radius: 15) [02:51:59 -10332.455641] SLOW spr round 13 (radius: 5) [02:53:23 -10328.864425] SLOW spr round 14 (radius: 5) [02:54:39 -10328.852015] SLOW spr round 15 (radius: 10) [02:55:57 -10302.782069] SLOW spr round 16 (radius: 5) [02:57:16 -10301.354497] SLOW spr round 17 (radius: 5) [02:58:29 -10301.317072] SLOW spr round 18 (radius: 10) [02:59:46 -10301.316958] SLOW spr round 19 (radius: 15) [03:01:15 -10301.305862] SLOW spr round 20 (radius: 20) [03:02:56 -10299.764019] SLOW spr round 21 (radius: 5) [03:04:20 -10299.763656] SLOW spr round 22 (radius: 10) [03:05:44 -10297.370027] SLOW spr round 23 (radius: 5) [03:07:03 -10297.346429] SLOW spr round 24 (radius: 10) [03:08:19 -10297.236013] SLOW spr round 25 (radius: 5) [03:09:39 -10296.905314] SLOW spr round 26 (radius: 5) [03:10:51 -10296.905254] SLOW spr round 27 (radius: 10) [03:12:05 -10296.905231] SLOW spr round 28 (radius: 15) [03:13:34 -10296.905186] SLOW spr round 29 (radius: 20) [03:15:13 -10296.905166] SLOW spr round 30 (radius: 25) [03:16:59 -10295.998318] SLOW spr round 31 (radius: 5) [03:18:26 -10295.934799] SLOW spr round 32 (radius: 10) [03:19:49 -10295.934378] SLOW spr round 33 (radius: 15) [03:21:16 -10295.725867] SLOW spr round 34 (radius: 5) [03:22:39 -10295.723576] SLOW spr round 35 (radius: 10) [03:23:59 -10295.722841] SLOW spr round 36 (radius: 15) [03:25:26 -10291.740530] SLOW spr round 37 (radius: 5) [03:26:48 -10291.494498] SLOW spr round 38 (radius: 5) [03:28:03 -10291.491764] SLOW spr round 39 (radius: 10) [03:29:18 -10291.491228] SLOW spr round 40 (radius: 15) [03:30:47 -10291.490707] SLOW spr round 41 (radius: 20) [03:32:25 -10291.490192] SLOW spr round 42 (radius: 25) [03:34:12 -10291.489684] Model parameter optimization (eps = 0.100000) [03:34:21] ML tree search #3, logLikelihood: -10291.310315 [03:34:21 -59386.384853] Initial branch length optimization [03:34:22 -49372.722131] Model parameter optimization (eps = 10.000000) [03:34:36 -49336.338313] AUTODETECT spr round 1 (radius: 5) [03:35:53 -30711.817680] AUTODETECT spr round 2 (radius: 10) [03:37:15 -22311.084446] AUTODETECT spr round 3 (radius: 15) [03:38:44 -18165.522053] AUTODETECT spr round 4 (radius: 20) [03:40:20 -14851.611115] AUTODETECT spr round 5 (radius: 25) [03:42:03 -14143.507508] SPR radius for FAST iterations: 25 (autodetect) [03:42:03 -14143.507508] Model parameter optimization (eps = 3.000000) [03:42:22 -14126.400536] FAST spr round 1 (radius: 25) [03:43:46 -11416.182370] FAST spr round 2 (radius: 25) [03:45:03 -10851.299208] FAST spr round 3 (radius: 25) [03:46:17 -10752.760290] FAST spr round 4 (radius: 25) [03:47:31 -10624.097608] FAST spr round 5 (radius: 25) [03:48:44 -10591.531339] FAST spr round 6 (radius: 25) [03:49:56 -10566.458827] FAST spr round 7 (radius: 25) [03:51:11 -10428.159449] FAST spr round 8 (radius: 25) [03:52:25 -10409.988694] FAST spr round 9 (radius: 25) [03:53:35 -10409.621767] FAST spr round 10 (radius: 25) [03:54:47 -10409.620642] Model parameter optimization (eps = 1.000000) [03:54:52 -10409.426390] SLOW spr round 1 (radius: 5) [03:56:06 -10406.288593] SLOW spr round 2 (radius: 5) [03:57:21 -10384.420973] SLOW spr round 3 (radius: 5) [03:58:34 -10345.392328] SLOW spr round 4 (radius: 5) [03:59:46 -10340.970152] SLOW spr round 5 (radius: 5) [04:00:56 -10340.970127] SLOW spr round 6 (radius: 10) [04:02:15 -10251.606551] SLOW spr round 7 (radius: 5) [04:03:35 -10237.404982] SLOW spr round 8 (radius: 5) [04:04:48 -10235.624336] SLOW spr round 9 (radius: 5) [04:06:00 -10235.623922] SLOW spr round 10 (radius: 10) [04:07:17 -10235.596128] SLOW spr round 11 (radius: 15) [04:08:46 -10234.738280] SLOW spr round 12 (radius: 5) [04:10:08 -10234.738086] SLOW spr round 13 (radius: 10) [04:11:26 -10234.563132] SLOW spr round 14 (radius: 5) [04:12:44 -10234.103818] SLOW spr round 15 (radius: 5) [04:13:56 -10234.103818] SLOW spr round 16 (radius: 10) [04:15:13 -10233.908720] SLOW spr round 17 (radius: 5) [04:16:30 -10233.908720] SLOW spr round 18 (radius: 10) [04:17:47 -10233.908715] SLOW spr round 19 (radius: 15) [04:19:18 -10233.865585] SLOW spr round 20 (radius: 20) [04:21:01 -10231.201662] SLOW spr round 21 (radius: 5) [04:22:24 -10231.201581] SLOW spr round 22 (radius: 10) [04:23:47 -10231.025859] SLOW spr round 23 (radius: 5) [04:25:06 -10231.025854] SLOW spr round 24 (radius: 10) [04:26:23 -10231.025849] SLOW spr round 25 (radius: 15) [04:27:56 -10231.025765] SLOW spr round 26 (radius: 20) [04:29:41 -10231.025746] SLOW spr round 27 (radius: 25) [04:31:33 -10229.518874] SLOW spr round 28 (radius: 5) [04:32:59 -10229.518874] SLOW spr round 29 (radius: 10) [04:34:23 -10229.518874] SLOW spr round 30 (radius: 15) [04:35:52 -10229.518874] SLOW spr round 31 (radius: 20) [04:37:34 -10229.518874] SLOW spr round 32 (radius: 25) [04:39:27 -10229.518874] Model parameter optimization (eps = 0.100000) [04:39:36] ML tree search #4, logLikelihood: -10229.067921 [04:39:36 -58732.342221] Initial branch length optimization [04:39:37 -48613.022263] Model parameter optimization (eps = 10.000000) [04:39:51 -48568.566514] AUTODETECT spr round 1 (radius: 5) [04:41:07 -29779.628489] AUTODETECT spr round 2 (radius: 10) [04:42:26 -22370.751555] AUTODETECT spr round 3 (radius: 15) [04:43:55 -17544.643393] AUTODETECT spr round 4 (radius: 20) [04:45:32 -15195.219345] AUTODETECT spr round 5 (radius: 25) [04:47:15 -13671.901395] SPR radius for FAST iterations: 25 (autodetect) [04:47:15 -13671.901395] Model parameter optimization (eps = 3.000000) [04:47:30 -13653.074662] FAST spr round 1 (radius: 25) [04:48:52 -11226.667359] FAST spr round 2 (radius: 25) [04:50:06 -11097.620734] FAST spr round 3 (radius: 25) [04:51:18 -11067.470976] FAST spr round 4 (radius: 25) [04:52:29 -11067.470392] Model parameter optimization (eps = 1.000000) [04:52:38 -11065.229485] SLOW spr round 1 (radius: 5) [04:53:52 -11062.014321] SLOW spr round 2 (radius: 5) [04:55:04 -11062.013788] SLOW spr round 3 (radius: 10) [04:56:20 -11058.076459] SLOW spr round 4 (radius: 5) [04:57:39 -11056.206349] SLOW spr round 5 (radius: 5) [04:58:53 -11052.718591] SLOW spr round 6 (radius: 5) [05:00:04 -11052.718477] SLOW spr round 7 (radius: 10) [05:01:20 -11052.718477] SLOW spr round 8 (radius: 15) [05:02:50 -10976.308547] SLOW spr round 9 (radius: 5) [05:04:13 -10953.852947] SLOW spr round 10 (radius: 5) [05:05:29 -10953.852945] SLOW spr round 11 (radius: 10) [05:06:44 -10953.589985] SLOW spr round 12 (radius: 5) [05:08:03 -10953.589440] SLOW spr round 13 (radius: 10) [05:09:19 -10949.272078] SLOW spr round 14 (radius: 5) [05:10:38 -10949.272001] SLOW spr round 15 (radius: 10) [05:11:53 -10949.272000] SLOW spr round 16 (radius: 15) [05:13:21 -10949.272000] SLOW spr round 17 (radius: 20) [05:15:05 -10944.716364] SLOW spr round 18 (radius: 5) [05:16:29 -10930.478850] SLOW spr round 19 (radius: 5) [05:17:46 -10930.478840] SLOW spr round 20 (radius: 10) [05:19:01 -10930.478839] SLOW spr round 21 (radius: 15) [05:20:30 -10930.478839] SLOW spr round 22 (radius: 20) [05:22:14 -10930.478839] SLOW spr round 23 (radius: 25) [05:24:19 -10930.478839] Model parameter optimization (eps = 0.100000) [05:24:23] ML tree search #5, logLikelihood: -10930.460657 [05:24:23 -58841.049689] Initial branch length optimization [05:24:24 -48902.140260] Model parameter optimization (eps = 10.000000) [05:24:47 -48863.226049] AUTODETECT spr round 1 (radius: 5) [05:26:06 -30062.561709] AUTODETECT spr round 2 (radius: 10) [05:27:27 -21367.949122] AUTODETECT spr round 3 (radius: 15) [05:28:56 -17784.328108] AUTODETECT spr round 4 (radius: 20) [05:30:37 -14661.989800] AUTODETECT spr round 5 (radius: 25) [05:32:18 -12808.267398] SPR radius for FAST iterations: 25 (autodetect) [05:32:18 -12808.267398] Model parameter optimization (eps = 3.000000) [05:32:34 -12789.946059] FAST spr round 1 (radius: 25) [05:33:57 -10529.996139] FAST spr round 2 (radius: 25) [05:35:13 -10391.298091] FAST spr round 3 (radius: 25) [05:36:27 -10345.638616] FAST spr round 4 (radius: 25) [05:37:38 -10344.481640] FAST spr round 5 (radius: 25) [05:38:49 -10344.481602] Model parameter optimization (eps = 1.000000) [05:38:57 -10343.662292] SLOW spr round 1 (radius: 5) [05:40:09 -10342.506442] SLOW spr round 2 (radius: 5) [05:41:19 -10340.645595] SLOW spr round 3 (radius: 5) [05:42:32 -10340.641492] SLOW spr round 4 (radius: 10) [05:43:50 -10335.750428] SLOW spr round 5 (radius: 5) [05:45:08 -10332.861980] SLOW spr round 6 (radius: 5) [05:46:22 -10330.943338] SLOW spr round 7 (radius: 5) [05:47:36 -10330.942107] SLOW spr round 8 (radius: 10) [05:48:54 -10323.824625] SLOW spr round 9 (radius: 5) [05:50:14 -10322.501719] SLOW spr round 10 (radius: 5) [05:51:28 -10321.343930] SLOW spr round 11 (radius: 5) [05:52:42 -10321.343890] SLOW spr round 12 (radius: 10) [05:53:58 -10321.343862] SLOW spr round 13 (radius: 15) [05:55:31 -10308.737048] SLOW spr round 14 (radius: 5) [05:56:55 -10280.108385] SLOW spr round 15 (radius: 5) [05:58:12 -10272.208993] SLOW spr round 16 (radius: 5) [05:59:24 -10272.208960] SLOW spr round 17 (radius: 10) [06:00:40 -10269.116312] SLOW spr round 18 (radius: 5) [06:01:59 -10269.116269] SLOW spr round 19 (radius: 10) [06:03:17 -10269.116211] SLOW spr round 20 (radius: 15) [06:04:45 -10251.979719] SLOW spr round 21 (radius: 5) [06:06:09 -10245.851070] SLOW spr round 22 (radius: 5) [06:07:23 -10245.850900] SLOW spr round 23 (radius: 10) [06:08:39 -10245.850894] SLOW spr round 24 (radius: 15) [06:10:11 -10245.850832] SLOW spr round 25 (radius: 20) [06:11:52 -10245.298951] SLOW spr round 26 (radius: 5) [06:13:18 -10245.298838] SLOW spr round 27 (radius: 10) [06:14:41 -10245.298784] SLOW spr round 28 (radius: 15) [06:16:09 -10245.298746] SLOW spr round 29 (radius: 20) [06:17:50 -10245.298730] SLOW spr round 30 (radius: 25) [06:19:42 -10243.920350] SLOW spr round 31 (radius: 5) [06:21:06 -10243.318751] SLOW spr round 32 (radius: 5) [06:22:23 -10243.318568] SLOW spr round 33 (radius: 10) [06:23:39 -10243.318563] SLOW spr round 34 (radius: 15) [06:25:09 -10243.318563] SLOW spr round 35 (radius: 20) [06:26:49 -10243.318563] SLOW spr round 36 (radius: 25) [06:28:39 -10243.318563] Model parameter optimization (eps = 0.100000) [06:28:46] ML tree search #6, logLikelihood: -10242.967282 [06:28:47 -59020.050526] Initial branch length optimization [06:28:48 -49052.963915] Model parameter optimization (eps = 10.000000) [06:29:03 -49034.304814] AUTODETECT spr round 1 (radius: 5) [06:30:20 -29847.034300] AUTODETECT spr round 2 (radius: 10) [06:31:39 -21766.599737] AUTODETECT spr round 3 (radius: 15) [06:33:06 -18212.717329] AUTODETECT spr round 4 (radius: 20) [06:34:43 -14755.812097] AUTODETECT spr round 5 (radius: 25) [06:36:24 -13749.886101] SPR radius for FAST iterations: 25 (autodetect) [06:36:24 -13749.886101] Model parameter optimization (eps = 3.000000) [06:36:36 -13726.166744] FAST spr round 1 (radius: 25) [06:37:56 -10640.240304] FAST spr round 2 (radius: 25) [06:39:08 -10375.028891] FAST spr round 3 (radius: 25) [06:40:19 -10346.099081] FAST spr round 4 (radius: 25) [06:41:29 -10338.087739] FAST spr round 5 (radius: 25) [06:42:40 -10330.036649] FAST spr round 6 (radius: 25) [06:43:50 -10330.036540] Model parameter optimization (eps = 1.000000) [06:43:59 -10328.895198] SLOW spr round 1 (radius: 5) [06:45:11 -10326.975441] SLOW spr round 2 (radius: 5) [06:46:24 -10326.697563] SLOW spr round 3 (radius: 5) [06:47:36 -10326.696581] SLOW spr round 4 (radius: 10) [06:48:53 -10325.070259] SLOW spr round 5 (radius: 5) [06:50:13 -10324.141165] SLOW spr round 6 (radius: 5) [06:51:26 -10320.749878] SLOW spr round 7 (radius: 5) [06:52:37 -10320.749822] SLOW spr round 8 (radius: 10) [06:53:55 -10318.351667] SLOW spr round 9 (radius: 5) [06:55:14 -10318.350894] SLOW spr round 10 (radius: 10) [06:56:32 -10312.563868] SLOW spr round 11 (radius: 5) [06:57:51 -10279.789420] SLOW spr round 12 (radius: 5) [06:59:05 -10278.644939] SLOW spr round 13 (radius: 5) [07:00:15 -10278.644888] SLOW spr round 14 (radius: 10) [07:01:30 -10232.148825] SLOW spr round 15 (radius: 5) [07:02:50 -10228.539674] SLOW spr round 16 (radius: 5) [07:04:03 -10228.418264] SLOW spr round 17 (radius: 5) [07:05:12 -10228.417919] SLOW spr round 18 (radius: 10) [07:06:28 -10228.417858] SLOW spr round 19 (radius: 15) [07:08:01 -10223.966263] SLOW spr round 20 (radius: 5) [07:09:24 -10223.549823] SLOW spr round 21 (radius: 5) [07:10:39 -10223.549691] SLOW spr round 22 (radius: 10) [07:11:57 -10223.549641] SLOW spr round 23 (radius: 15) [07:13:28 -10223.549627] SLOW spr round 24 (radius: 20) [07:15:17 -10223.216666] SLOW spr round 25 (radius: 5) [07:16:42 -10223.216639] SLOW spr round 26 (radius: 10) [07:18:05 -10223.039982] SLOW spr round 27 (radius: 5) [07:19:21 -10223.039962] SLOW spr round 28 (radius: 10) [07:20:37 -10223.039961] SLOW spr round 29 (radius: 15) [07:22:08 -10223.039942] SLOW spr round 30 (radius: 20) [07:23:58 -10223.039941] SLOW spr round 31 (radius: 25) [07:26:04 -10223.039940] Model parameter optimization (eps = 0.100000) [07:26:11] ML tree search #7, logLikelihood: -10222.917745 [07:26:11 -58569.334454] Initial branch length optimization [07:26:13 -48617.126748] Model parameter optimization (eps = 10.000000) [07:26:33 -48599.549188] AUTODETECT spr round 1 (radius: 5) [07:27:48 -30902.147179] AUTODETECT spr round 2 (radius: 10) [07:29:06 -22740.164239] AUTODETECT spr round 3 (radius: 15) [07:30:33 -17497.573541] AUTODETECT spr round 4 (radius: 20) [07:32:03 -15818.223853] AUTODETECT spr round 5 (radius: 25) [07:33:37 -14045.146532] SPR radius for FAST iterations: 25 (autodetect) [07:33:37 -14045.146532] Model parameter optimization (eps = 3.000000) [07:33:50 -14023.282405] FAST spr round 1 (radius: 25) [07:35:14 -10958.431108] FAST spr round 2 (radius: 25) [07:36:28 -10497.574376] FAST spr round 3 (radius: 25) [07:37:40 -10438.603973] FAST spr round 4 (radius: 25) [07:38:51 -10426.191914] FAST spr round 5 (radius: 25) [07:40:03 -10426.142968] Model parameter optimization (eps = 1.000000) [07:40:10 -10425.320388] SLOW spr round 1 (radius: 5) [07:41:22 -10421.369562] SLOW spr round 2 (radius: 5) [07:42:34 -10417.930589] SLOW spr round 3 (radius: 5) [07:43:45 -10417.930483] SLOW spr round 4 (radius: 10) [07:45:03 -10407.346783] SLOW spr round 5 (radius: 5) [07:46:23 -10372.966559] SLOW spr round 6 (radius: 5) [07:47:35 -10372.815793] SLOW spr round 7 (radius: 5) [07:48:45 -10372.815789] SLOW spr round 8 (radius: 10) [07:50:02 -10372.815776] SLOW spr round 9 (radius: 15) [07:51:35 -10314.319256] SLOW spr round 10 (radius: 5) [07:52:57 -10262.429183] SLOW spr round 11 (radius: 5) [07:54:14 -10253.649989] SLOW spr round 12 (radius: 5) [07:55:25 -10253.647211] SLOW spr round 13 (radius: 10) [07:56:43 -10251.669766] SLOW spr round 14 (radius: 5) [07:58:02 -10250.670875] SLOW spr round 15 (radius: 5) [07:59:16 -10248.013948] SLOW spr round 16 (radius: 5) [08:00:28 -10247.002311] SLOW spr round 17 (radius: 5) [08:01:40 -10246.215744] SLOW spr round 18 (radius: 5) [08:02:50 -10246.214657] SLOW spr round 19 (radius: 10) [08:04:06 -10246.214165] SLOW spr round 20 (radius: 15) [08:05:38 -10246.213929] SLOW spr round 21 (radius: 20) [08:07:33 -10241.131151] SLOW spr round 22 (radius: 5) [08:08:58 -10237.498254] SLOW spr round 23 (radius: 5) [08:10:15 -10237.497822] SLOW spr round 24 (radius: 10) [08:11:31 -10237.497455] SLOW spr round 25 (radius: 15) [08:13:01 -10237.497094] SLOW spr round 26 (radius: 20) [08:14:55 -10237.201648] SLOW spr round 27 (radius: 5) [08:16:17 -10237.201294] SLOW spr round 28 (radius: 10) [08:17:39 -10236.748134] SLOW spr round 29 (radius: 5) [08:18:56 -10236.747380] SLOW spr round 30 (radius: 10) [08:20:11 -10236.747007] SLOW spr round 31 (radius: 15) [08:21:40 -10236.746924] SLOW spr round 32 (radius: 20) [08:23:29 -10236.746924] SLOW spr round 33 (radius: 25) [08:25:47 -10236.746924] Model parameter optimization (eps = 0.100000) [08:25:57] ML tree search #8, logLikelihood: -10235.840375 [08:25:57 -58812.551678] Initial branch length optimization [08:25:59 -48759.767762] Model parameter optimization (eps = 10.000000) [08:26:16 -48727.707286] AUTODETECT spr round 1 (radius: 5) [08:27:33 -30469.957725] AUTODETECT spr round 2 (radius: 10) [08:28:55 -21776.522113] AUTODETECT spr round 3 (radius: 15) [08:30:22 -17731.992002] AUTODETECT spr round 4 (radius: 20) [08:31:56 -15108.833216] AUTODETECT spr round 5 (radius: 25) [08:33:37 -13702.098776] SPR radius for FAST iterations: 25 (autodetect) [08:33:38 -13702.098776] Model parameter optimization (eps = 3.000000) [08:33:51 -13692.442660] FAST spr round 1 (radius: 25) [08:35:15 -10953.306992] FAST spr round 2 (radius: 25) [08:36:31 -10693.503227] FAST spr round 3 (radius: 25) [08:37:45 -10568.932105] FAST spr round 4 (radius: 25) [08:38:58 -10523.485010] FAST spr round 5 (radius: 25) [08:40:07 -10523.484537] Model parameter optimization (eps = 1.000000) [08:40:13 -10523.095268] SLOW spr round 1 (radius: 5) [08:41:26 -10521.471423] SLOW spr round 2 (radius: 5) [08:42:39 -10521.470610] SLOW spr round 3 (radius: 10) [08:43:56 -10489.473226] SLOW spr round 4 (radius: 5) [08:45:16 -10480.876733] SLOW spr round 5 (radius: 5) [08:46:31 -10480.646167] SLOW spr round 6 (radius: 5) [08:47:44 -10480.646140] SLOW spr round 7 (radius: 10) [08:48:59 -10480.646140] SLOW spr round 8 (radius: 15) [08:50:31 -10432.755814] SLOW spr round 9 (radius: 5) [08:51:57 -10294.313787] SLOW spr round 10 (radius: 5) [08:53:15 -10283.876912] SLOW spr round 11 (radius: 5) [08:54:30 -10281.623982] SLOW spr round 12 (radius: 5) [08:55:42 -10281.623275] SLOW spr round 13 (radius: 10) [08:56:56 -10235.262703] SLOW spr round 14 (radius: 5) [08:58:19 -10222.546520] SLOW spr round 15 (radius: 5) [08:59:32 -10222.546400] SLOW spr round 16 (radius: 10) [09:00:47 -10222.546398] SLOW spr round 17 (radius: 15) [09:02:18 -10222.215296] SLOW spr round 18 (radius: 5) [09:03:40 -10222.215294] SLOW spr round 19 (radius: 10) [09:05:00 -10222.215292] SLOW spr round 20 (radius: 15) [09:06:31 -10222.215290] SLOW spr round 21 (radius: 20) [09:08:21 -10221.972889] SLOW spr round 22 (radius: 5) [09:09:46 -10220.346316] SLOW spr round 23 (radius: 5) [09:11:02 -10220.346136] SLOW spr round 24 (radius: 10) [09:12:17 -10220.346122] SLOW spr round 25 (radius: 15) [09:13:49 -10220.346119] SLOW spr round 26 (radius: 20) [09:15:39 -10220.346115] SLOW spr round 27 (radius: 25) [09:17:55 -10220.223722] SLOW spr round 28 (radius: 5) [09:19:20 -10220.223719] SLOW spr round 29 (radius: 10) [09:20:42 -10220.223717] SLOW spr round 30 (radius: 15) [09:22:13 -10220.223715] SLOW spr round 31 (radius: 20) [09:24:03 -10220.223713] SLOW spr round 32 (radius: 25) [09:26:17 -10220.223711] Model parameter optimization (eps = 0.100000) [09:26:26] ML tree search #9, logLikelihood: -10219.756194 [09:26:26 -59278.814882] Initial branch length optimization [09:26:28 -49243.730006] Model parameter optimization (eps = 10.000000) [09:26:49 -49217.140577] AUTODETECT spr round 1 (radius: 5) [09:28:06 -30826.081327] AUTODETECT spr round 2 (radius: 10) [09:29:24 -21963.140758] AUTODETECT spr round 3 (radius: 15) [09:30:54 -16833.183289] AUTODETECT spr round 4 (radius: 20) [09:32:25 -14678.125874] AUTODETECT spr round 5 (radius: 25) [09:34:03 -13843.601112] SPR radius for FAST iterations: 25 (autodetect) [09:34:03 -13843.601112] Model parameter optimization (eps = 3.000000) [09:34:19 -13822.570773] FAST spr round 1 (radius: 25) [09:35:43 -10874.800543] FAST spr round 2 (radius: 25) [09:36:57 -10673.027188] FAST spr round 3 (radius: 25) [09:38:11 -10636.864818] FAST spr round 4 (radius: 25) [09:39:20 -10632.065422] FAST spr round 5 (radius: 25) [09:40:30 -10631.402606] FAST spr round 6 (radius: 25) [09:41:40 -10631.402457] Model parameter optimization (eps = 1.000000) [09:41:55 -10628.811840] SLOW spr round 1 (radius: 5) [09:43:08 -10621.191449] SLOW spr round 2 (radius: 5) [09:44:21 -10618.204453] SLOW spr round 3 (radius: 5) [09:45:34 -10617.697822] SLOW spr round 4 (radius: 5) [09:46:46 -10617.692604] SLOW spr round 5 (radius: 10) [09:48:03 -10612.428782] SLOW spr round 6 (radius: 5) [09:49:24 -10610.751276] SLOW spr round 7 (radius: 5) [09:50:38 -10610.751216] SLOW spr round 8 (radius: 10) [09:51:54 -10610.751154] SLOW spr round 9 (radius: 15) [09:53:24 -10596.033827] SLOW spr round 10 (radius: 5) [09:54:47 -10590.943196] SLOW spr round 11 (radius: 5) [09:56:02 -10590.943115] SLOW spr round 12 (radius: 10) [09:57:17 -10590.943035] SLOW spr round 13 (radius: 15) [09:58:45 -10590.942981] SLOW spr round 14 (radius: 20) [10:00:28 -10589.295146] SLOW spr round 15 (radius: 5) [10:01:52 -10588.117814] SLOW spr round 16 (radius: 5) [10:03:09 -10588.117713] SLOW spr round 17 (radius: 10) [10:04:25 -10588.117661] SLOW spr round 18 (radius: 15) [10:05:53 -10588.117610] SLOW spr round 19 (radius: 20) [10:07:35 -10588.117559] SLOW spr round 20 (radius: 25) [10:09:39 -10460.382350] SLOW spr round 21 (radius: 5) [10:11:05 -10432.692436] SLOW spr round 22 (radius: 5) [10:12:25 -10384.746478] SLOW spr round 23 (radius: 5) [10:13:38 -10384.744329] SLOW spr round 24 (radius: 10) [10:14:54 -10384.744212] SLOW spr round 25 (radius: 15) [10:16:23 -10378.484309] SLOW spr round 26 (radius: 5) [10:17:47 -10350.348761] SLOW spr round 27 (radius: 5) [10:19:03 -10347.158751] SLOW spr round 28 (radius: 5) [10:20:14 -10347.152789] SLOW spr round 29 (radius: 10) [10:21:30 -10347.152740] SLOW spr round 30 (radius: 15) [10:22:58 -10347.152693] SLOW spr round 31 (radius: 20) [10:24:39 -10336.374160] SLOW spr round 32 (radius: 5) [10:26:02 -10333.757106] SLOW spr round 33 (radius: 5) [10:27:18 -10333.757061] SLOW spr round 34 (radius: 10) [10:28:34 -10333.757017] SLOW spr round 35 (radius: 15) [10:30:02 -10333.756973] SLOW spr round 36 (radius: 20) [10:31:42 -10333.756929] SLOW spr round 37 (radius: 25) [10:33:37 -10333.241299] SLOW spr round 38 (radius: 5) [10:35:00 -10333.241255] SLOW spr round 39 (radius: 10) [10:36:22 -10333.241213] SLOW spr round 40 (radius: 15) [10:37:51 -10333.241152] SLOW spr round 41 (radius: 20) [10:39:33 -10333.241110] SLOW spr round 42 (radius: 25) [10:41:28 -10333.241068] Model parameter optimization (eps = 0.100000) [10:41:35] ML tree search #10, logLikelihood: -10333.048567 [10:41:35 -59417.038606] Initial branch length optimization [10:41:37 -49269.500533] Model parameter optimization (eps = 10.000000) [10:41:56 -49241.621040] AUTODETECT spr round 1 (radius: 5) [10:43:13 -31118.281262] AUTODETECT spr round 2 (radius: 10) [10:44:32 -22689.310101] AUTODETECT spr round 3 (radius: 15) [10:46:04 -16506.237811] AUTODETECT spr round 4 (radius: 20) [10:47:39 -15079.627177] AUTODETECT spr round 5 (radius: 25) [10:49:22 -14085.249264] SPR radius for FAST iterations: 25 (autodetect) [10:49:22 -14085.249264] Model parameter optimization (eps = 3.000000) [10:49:38 -14064.693444] FAST spr round 1 (radius: 25) [10:51:02 -10956.068421] FAST spr round 2 (radius: 25) [10:52:17 -10369.163265] FAST spr round 3 (radius: 25) [10:53:30 -10321.014438] FAST spr round 4 (radius: 25) [10:54:43 -10268.559896] FAST spr round 5 (radius: 25) [10:55:55 -10268.559759] Model parameter optimization (eps = 1.000000) [10:56:07 -10266.832087] SLOW spr round 1 (radius: 5) [10:57:20 -10265.181122] SLOW spr round 2 (radius: 5) [10:58:34 -10265.179656] SLOW spr round 3 (radius: 10) [10:59:50 -10264.033080] SLOW spr round 4 (radius: 5) [11:01:09 -10262.652391] SLOW spr round 5 (radius: 5) [11:02:23 -10262.651739] SLOW spr round 6 (radius: 10) [11:03:39 -10262.651694] SLOW spr round 7 (radius: 15) [11:05:10 -10260.264323] SLOW spr round 8 (radius: 5) [11:06:34 -10253.150630] SLOW spr round 9 (radius: 5) [11:07:51 -10252.341401] SLOW spr round 10 (radius: 5) [11:09:04 -10252.341343] SLOW spr round 11 (radius: 10) [11:10:19 -10251.166829] SLOW spr round 12 (radius: 5) [11:11:40 -10249.609882] SLOW spr round 13 (radius: 5) [11:12:53 -10249.609487] SLOW spr round 14 (radius: 10) [11:14:08 -10249.609456] SLOW spr round 15 (radius: 15) [11:15:38 -10246.251879] SLOW spr round 16 (radius: 5) [11:17:00 -10246.251824] SLOW spr round 17 (radius: 10) [11:18:19 -10245.190374] SLOW spr round 18 (radius: 5) [11:19:38 -10244.789954] SLOW spr round 19 (radius: 5) [11:20:51 -10244.789705] SLOW spr round 20 (radius: 10) [11:22:06 -10244.789701] SLOW spr round 21 (radius: 15) [11:23:35 -10243.960043] SLOW spr round 22 (radius: 5) [11:24:58 -10242.931184] SLOW spr round 23 (radius: 5) [11:26:12 -10242.930106] SLOW spr round 24 (radius: 10) [11:27:26 -10242.517571] SLOW spr round 25 (radius: 5) [11:28:46 -10241.392369] SLOW spr round 26 (radius: 5) [11:29:59 -10241.392151] SLOW spr round 27 (radius: 10) [11:31:14 -10241.391985] SLOW spr round 28 (radius: 15) [11:32:44 -10238.863734] SLOW spr round 29 (radius: 5) [11:34:06 -10238.838985] SLOW spr round 30 (radius: 10) [11:35:23 -10238.838946] SLOW spr round 31 (radius: 15) [11:36:51 -10238.838944] SLOW spr round 32 (radius: 20) [11:38:37 -10230.789251] SLOW spr round 33 (radius: 5) [11:40:02 -10230.632583] SLOW spr round 34 (radius: 5) [11:41:18 -10230.631497] SLOW spr round 35 (radius: 10) [11:42:34 -10229.847657] SLOW spr round 36 (radius: 5) [11:43:52 -10229.789217] SLOW spr round 37 (radius: 10) [11:45:08 -10229.788954] SLOW spr round 38 (radius: 15) [11:46:37 -10229.788937] SLOW spr round 39 (radius: 20) [11:48:21 -10229.788933] SLOW spr round 40 (radius: 25) [11:50:18 -10228.673399] SLOW spr round 41 (radius: 5) [11:51:42 -10228.673345] SLOW spr round 42 (radius: 10) [11:53:04 -10228.673344] SLOW spr round 43 (radius: 15) [11:54:33 -10228.673342] SLOW spr round 44 (radius: 20) [11:56:16 -10228.673338] SLOW spr round 45 (radius: 25) [11:58:12 -10228.673335] Model parameter optimization (eps = 0.100000) [11:58:18] ML tree search #11, logLikelihood: -10228.504657 [11:58:18 -58610.102391] Initial branch length optimization [11:58:19 -48548.986410] Model parameter optimization (eps = 10.000000) [11:58:37 -48519.818324] AUTODETECT spr round 1 (radius: 5) [11:59:54 -29876.999596] AUTODETECT spr round 2 (radius: 10) [12:01:16 -21745.460853] AUTODETECT spr round 3 (radius: 15) [12:02:45 -17173.702001] AUTODETECT spr round 4 (radius: 20) [12:04:20 -14886.888398] AUTODETECT spr round 5 (radius: 25) [12:06:12 -13508.869834] SPR radius for FAST iterations: 25 (autodetect) [12:06:12 -13508.869834] Model parameter optimization (eps = 3.000000) [12:06:25 -13494.387806] FAST spr round 1 (radius: 25) [12:07:51 -10786.981212] FAST spr round 2 (radius: 25) [12:09:06 -10380.238099] FAST spr round 3 (radius: 25) [12:10:21 -10306.257935] FAST spr round 4 (radius: 25) [12:11:33 -10275.737259] FAST spr round 5 (radius: 25) [12:12:44 -10275.026788] FAST spr round 6 (radius: 25) [12:13:55 -10275.025927] Model parameter optimization (eps = 1.000000) [12:14:05 -10273.981934] SLOW spr round 1 (radius: 5) [12:15:18 -10272.693860] SLOW spr round 2 (radius: 5) [12:16:28 -10272.693651] SLOW spr round 3 (radius: 10) [12:17:43 -10240.176655] SLOW spr round 4 (radius: 5) [12:19:04 -10236.341237] SLOW spr round 5 (radius: 5) [12:20:17 -10236.338915] SLOW spr round 6 (radius: 10) [12:21:30 -10236.338717] SLOW spr round 7 (radius: 15) [12:23:01 -10235.434164] SLOW spr round 8 (radius: 5) [12:24:23 -10233.251751] SLOW spr round 9 (radius: 5) [12:25:39 -10233.251370] SLOW spr round 10 (radius: 10) [12:26:54 -10233.251212] SLOW spr round 11 (radius: 15) [12:28:24 -10233.251055] SLOW spr round 12 (radius: 20) [12:30:09 -10231.689434] SLOW spr round 13 (radius: 5) [12:31:31 -10231.689244] SLOW spr round 14 (radius: 10) [12:32:53 -10231.546241] SLOW spr round 15 (radius: 5) [12:34:10 -10231.546086] SLOW spr round 16 (radius: 10) [12:35:25 -10231.441842] SLOW spr round 17 (radius: 5) [12:36:43 -10231.113500] SLOW spr round 18 (radius: 5) [12:37:56 -10231.113343] SLOW spr round 19 (radius: 10) [12:39:11 -10231.113186] SLOW spr round 20 (radius: 15) [12:40:41 -10231.113028] SLOW spr round 21 (radius: 20) [12:42:26 -10231.112870] SLOW spr round 22 (radius: 25) [12:44:25 -10231.112711] Model parameter optimization (eps = 0.100000) [12:44:28] ML tree search #12, logLikelihood: -10231.103857 [12:44:28 -59337.636561] Initial branch length optimization [12:44:29 -49469.355435] Model parameter optimization (eps = 10.000000) [12:44:49 -49436.062815] AUTODETECT spr round 1 (radius: 5) [12:46:07 -30443.432872] AUTODETECT spr round 2 (radius: 10) [12:47:29 -22393.774624] AUTODETECT spr round 3 (radius: 15) [12:48:58 -18102.764399] AUTODETECT spr round 4 (radius: 20) [12:50:34 -15352.895807] AUTODETECT spr round 5 (radius: 25) [12:52:12 -14412.514031] SPR radius for FAST iterations: 25 (autodetect) [12:52:12 -14412.514031] Model parameter optimization (eps = 3.000000) [12:52:26 -14404.013169] FAST spr round 1 (radius: 25) [12:53:50 -10651.070409] FAST spr round 2 (radius: 25) [12:55:05 -10390.317385] FAST spr round 3 (radius: 25) [12:56:19 -10365.096865] FAST spr round 4 (radius: 25) [12:57:30 -10362.847665] FAST spr round 5 (radius: 25) [12:58:41 -10362.741624] FAST spr round 6 (radius: 25) [12:59:52 -10362.741191] Model parameter optimization (eps = 1.000000) [12:59:58 -10362.232063] SLOW spr round 1 (radius: 5) [13:01:11 -10358.535680] SLOW spr round 2 (radius: 5) [13:02:22 -10358.534534] SLOW spr round 3 (radius: 10) [13:03:41 -10353.714160] SLOW spr round 4 (radius: 5) [13:05:01 -10351.711569] SLOW spr round 5 (radius: 5) [13:06:15 -10351.172563] SLOW spr round 6 (radius: 5) [13:07:27 -10351.172256] SLOW spr round 7 (radius: 10) [13:08:43 -10351.172015] SLOW spr round 8 (radius: 15) [13:10:14 -10349.249286] SLOW spr round 9 (radius: 5) [13:11:36 -10345.060305] SLOW spr round 10 (radius: 5) [13:12:52 -10345.060061] SLOW spr round 11 (radius: 10) [13:14:07 -10345.059845] SLOW spr round 12 (radius: 15) [13:15:36 -10345.059631] SLOW spr round 13 (radius: 20) [13:17:15 -10236.646434] SLOW spr round 14 (radius: 5) [13:18:39 -10236.527645] SLOW spr round 15 (radius: 5) [13:19:56 -10236.527405] SLOW spr round 16 (radius: 10) [13:21:13 -10235.858505] SLOW spr round 17 (radius: 5) [13:22:33 -10234.737886] SLOW spr round 18 (radius: 5) [13:23:46 -10233.572999] SLOW spr round 19 (radius: 5) [13:24:57 -10233.572778] SLOW spr round 20 (radius: 10) [13:26:14 -10233.572572] SLOW spr round 21 (radius: 15) [13:27:44 -10233.572369] SLOW spr round 22 (radius: 20) [13:29:22 -10233.572168] SLOW spr round 23 (radius: 25) [13:31:14 -10233.571969] Model parameter optimization (eps = 0.100000) [13:31:21] ML tree search #13, logLikelihood: -10233.458454 [13:31:21 -58682.982972] Initial branch length optimization [13:31:22 -48651.384480] Model parameter optimization (eps = 10.000000) [13:31:39 -48619.419205] AUTODETECT spr round 1 (radius: 5) [13:32:55 -30539.672138] AUTODETECT spr round 2 (radius: 10) [13:34:17 -22038.039463] AUTODETECT spr round 3 (radius: 15) [13:35:43 -18684.206856] AUTODETECT spr round 4 (radius: 20) [13:37:20 -16295.225747] AUTODETECT spr round 5 (radius: 25) [13:39:01 -14665.898676] SPR radius for FAST iterations: 25 (autodetect) [13:39:01 -14665.898676] Model parameter optimization (eps = 3.000000) [13:39:16 -14645.928204] FAST spr round 1 (radius: 25) [13:40:42 -10969.080166] FAST spr round 2 (radius: 25) [13:41:56 -10440.294900] FAST spr round 3 (radius: 25) [13:43:08 -10334.260227] FAST spr round 4 (radius: 25) [13:44:20 -10325.962964] FAST spr round 5 (radius: 25) [13:45:32 -10325.961874] Model parameter optimization (eps = 1.000000) [13:45:42 -10324.550953] SLOW spr round 1 (radius: 5) [13:46:55 -10322.335683] SLOW spr round 2 (radius: 5) [13:48:08 -10322.335397] SLOW spr round 3 (radius: 10) [13:49:24 -10320.836759] SLOW spr round 4 (radius: 5) [13:50:43 -10318.144843] SLOW spr round 5 (radius: 5) [13:51:54 -10318.144783] SLOW spr round 6 (radius: 10) [13:53:10 -10318.144728] SLOW spr round 7 (radius: 15) [13:54:40 -10318.101388] SLOW spr round 8 (radius: 20) [13:56:29 -10277.319042] SLOW spr round 9 (radius: 5) [13:57:54 -10260.934777] SLOW spr round 10 (radius: 5) [13:59:11 -10259.261696] SLOW spr round 11 (radius: 5) [14:00:22 -10259.258261] SLOW spr round 12 (radius: 10) [14:01:37 -10259.258251] SLOW spr round 13 (radius: 15) [14:03:09 -10258.948748] SLOW spr round 14 (radius: 5) [14:04:30 -10258.948727] SLOW spr round 15 (radius: 10) [14:05:48 -10258.314496] SLOW spr round 16 (radius: 5) [14:07:05 -10258.119434] SLOW spr round 17 (radius: 5) [14:08:17 -10258.119423] SLOW spr round 18 (radius: 10) [14:09:32 -10258.119419] SLOW spr round 19 (radius: 15) [14:11:03 -10258.119402] SLOW spr round 20 (radius: 20) [14:12:55 -10258.119360] SLOW spr round 21 (radius: 25) [14:15:04 -10257.226912] SLOW spr round 22 (radius: 5) [14:16:27 -10257.226910] SLOW spr round 23 (radius: 10) [14:17:51 -10257.050099] SLOW spr round 24 (radius: 5) [14:19:06 -10257.050098] SLOW spr round 25 (radius: 10) [14:20:21 -10256.951663] SLOW spr round 26 (radius: 15) [14:21:52 -10256.951574] SLOW spr round 27 (radius: 20) [14:23:41 -10256.951570] SLOW spr round 28 (radius: 25) [14:25:53 -10256.951569] Model parameter optimization (eps = 0.100000) [14:25:58] ML tree search #14, logLikelihood: -10256.854343 [14:25:58 -58687.322768] Initial branch length optimization [14:25:59 -48996.644903] Model parameter optimization (eps = 10.000000) [14:26:19 -48960.827092] AUTODETECT spr round 1 (radius: 5) [14:27:37 -31371.346762] AUTODETECT spr round 2 (radius: 10) [14:28:59 -23373.277350] AUTODETECT spr round 3 (radius: 15) [14:30:28 -18927.035562] AUTODETECT spr round 4 (radius: 20) [14:32:04 -16093.912038] AUTODETECT spr round 5 (radius: 25) [14:33:38 -14761.655929] SPR radius for FAST iterations: 25 (autodetect) [14:33:38 -14761.655929] Model parameter optimization (eps = 3.000000) [14:33:53 -14733.950756] FAST spr round 1 (radius: 25) [14:35:20 -11624.808258] FAST spr round 2 (radius: 25) [14:36:36 -10805.294358] FAST spr round 3 (radius: 25) [14:37:49 -10514.793143] FAST spr round 4 (radius: 25) [14:39:03 -10371.051570] FAST spr round 5 (radius: 25) [14:40:14 -10371.046443] Model parameter optimization (eps = 1.000000) [14:40:25 -10368.356482] SLOW spr round 1 (radius: 5) [14:41:39 -10366.094818] SLOW spr round 2 (radius: 5) [14:42:53 -10365.707588] SLOW spr round 3 (radius: 5) [14:44:06 -10365.293340] SLOW spr round 4 (radius: 5) [14:45:18 -10365.293189] SLOW spr round 5 (radius: 10) [14:46:36 -10359.300845] SLOW spr round 6 (radius: 5) [14:47:56 -10295.290614] SLOW spr round 7 (radius: 5) [14:49:12 -10294.692806] SLOW spr round 8 (radius: 5) [14:50:24 -10294.692660] SLOW spr round 9 (radius: 10) [14:51:40 -10294.447725] SLOW spr round 10 (radius: 5) [14:52:59 -10294.447687] SLOW spr round 11 (radius: 10) [14:54:16 -10294.447684] SLOW spr round 12 (radius: 15) [14:55:51 -10277.241619] SLOW spr round 13 (radius: 5) [14:57:14 -10277.241605] SLOW spr round 14 (radius: 10) [14:58:37 -10274.395035] SLOW spr round 15 (radius: 5) [14:59:57 -10272.264571] SLOW spr round 16 (radius: 5) [15:01:11 -10271.674862] SLOW spr round 17 (radius: 5) [15:02:22 -10271.674825] SLOW spr round 18 (radius: 10) [15:03:39 -10271.674822] SLOW spr round 19 (radius: 15) [15:05:12 -10271.674819] SLOW spr round 20 (radius: 20) [15:07:10 -10258.530596] SLOW spr round 21 (radius: 5) [15:08:38 -10255.908836] SLOW spr round 22 (radius: 5) [15:09:58 -10242.194799] SLOW spr round 23 (radius: 5) [15:11:12 -10238.229579] SLOW spr round 24 (radius: 5) [15:12:24 -10238.229573] SLOW spr round 25 (radius: 10) [15:13:40 -10238.229569] SLOW spr round 26 (radius: 15) [15:15:14 -10238.229566] SLOW spr round 27 (radius: 20) [15:17:10 -10237.842793] SLOW spr round 28 (radius: 5) [15:18:34 -10237.842750] SLOW spr round 29 (radius: 10) [15:19:58 -10237.527593] SLOW spr round 30 (radius: 5) [15:21:17 -10237.527590] SLOW spr round 31 (radius: 10) [15:22:34 -10237.527587] SLOW spr round 32 (radius: 15) [15:24:08 -10237.527584] SLOW spr round 33 (radius: 20) [15:26:03 -10237.527582] SLOW spr round 34 (radius: 25) [15:28:23 -10235.847798] SLOW spr round 35 (radius: 5) [15:29:49 -10235.847620] SLOW spr round 36 (radius: 10) [15:31:13 -10235.847481] SLOW spr round 37 (radius: 15) [15:32:46 -10235.847342] SLOW spr round 38 (radius: 20) [15:34:42 -10235.847202] SLOW spr round 39 (radius: 25) [15:37:01 -10235.847060] Model parameter optimization (eps = 0.100000) [15:37:06] ML tree search #15, logLikelihood: -10235.789115 [15:37:06 -58868.453691] Initial branch length optimization [15:37:07 -48632.207723] Model parameter optimization (eps = 10.000000) [15:37:22 -48594.451597] AUTODETECT spr round 1 (radius: 5) [15:38:39 -30638.792343] AUTODETECT spr round 2 (radius: 10) [15:40:00 -22499.176905] AUTODETECT spr round 3 (radius: 15) [15:41:31 -17858.054540] AUTODETECT spr round 4 (radius: 20) [15:43:05 -15369.229901] AUTODETECT spr round 5 (radius: 25) [15:44:45 -14056.655213] SPR radius for FAST iterations: 25 (autodetect) [15:44:45 -14056.655213] Model parameter optimization (eps = 3.000000) [15:45:03 -14041.855383] FAST spr round 1 (radius: 25) [15:46:27 -11255.339127] FAST spr round 2 (radius: 25) [15:47:43 -10674.495765] FAST spr round 3 (radius: 25) [15:48:55 -10518.902913] FAST spr round 4 (radius: 25) [15:50:07 -10429.949652] FAST spr round 5 (radius: 25) [15:51:18 -10424.752346] FAST spr round 6 (radius: 25) [15:52:28 -10403.411577] FAST spr round 7 (radius: 25) [15:53:41 -10401.860172] FAST spr round 8 (radius: 25) [15:54:53 -10401.859547] Model parameter optimization (eps = 1.000000) [15:54:59 -10401.273778] SLOW spr round 1 (radius: 5) [15:56:11 -10395.611616] SLOW spr round 2 (radius: 5) [15:57:25 -10389.659630] SLOW spr round 3 (radius: 5) [15:58:37 -10386.774683] SLOW spr round 4 (radius: 5) [15:59:49 -10386.773117] SLOW spr round 5 (radius: 10) [16:01:08 -10340.925353] SLOW spr round 6 (radius: 5) [16:02:30 -10326.492163] SLOW spr round 7 (radius: 5) [16:03:43 -10325.786118] SLOW spr round 8 (radius: 5) [16:04:55 -10325.785806] SLOW spr round 9 (radius: 10) [16:06:13 -10325.785744] SLOW spr round 10 (radius: 15) [16:07:46 -10268.612426] SLOW spr round 11 (radius: 5) [16:09:11 -10247.426505] SLOW spr round 12 (radius: 5) [16:10:25 -10247.426251] SLOW spr round 13 (radius: 10) [16:11:42 -10247.426250] SLOW spr round 14 (radius: 15) [16:13:14 -10247.426213] SLOW spr round 15 (radius: 20) [16:14:57 -10240.912948] SLOW spr round 16 (radius: 5) [16:16:21 -10240.912823] SLOW spr round 17 (radius: 10) [16:17:46 -10240.912801] SLOW spr round 18 (radius: 15) [16:19:18 -10240.912738] SLOW spr round 19 (radius: 20) [16:21:01 -10240.912728] SLOW spr round 20 (radius: 25) [16:22:55 -10238.737519] SLOW spr round 21 (radius: 5) [16:24:20 -10238.572845] SLOW spr round 22 (radius: 5) [16:25:36 -10238.572479] SLOW spr round 23 (radius: 10) [16:26:53 -10235.767812] SLOW spr round 24 (radius: 5) [16:28:11 -10235.766037] SLOW spr round 25 (radius: 10) [16:29:27 -10235.766034] SLOW spr round 26 (radius: 15) [16:30:58 -10235.766030] SLOW spr round 27 (radius: 20) [16:32:39 -10235.766029] SLOW spr round 28 (radius: 25) [16:34:31 -10235.766029] Model parameter optimization (eps = 0.100000) [16:34:40] ML tree search #16, logLikelihood: -10235.337274 [16:34:40 -59394.809538] Initial branch length optimization [16:34:41 -49303.888596] Model parameter optimization (eps = 10.000000) [16:34:59 -49270.751077] AUTODETECT spr round 1 (radius: 5) [16:36:14 -30549.807045] AUTODETECT spr round 2 (radius: 10) [16:37:33 -22810.620931] AUTODETECT spr round 3 (radius: 15) [16:39:00 -18378.373244] AUTODETECT spr round 4 (radius: 20) [16:40:35 -14707.328507] AUTODETECT spr round 5 (radius: 25) [16:42:19 -13548.463716] SPR radius for FAST iterations: 25 (autodetect) [16:42:19 -13548.463716] Model parameter optimization (eps = 3.000000) [16:42:32 -13532.018125] FAST spr round 1 (radius: 25) [16:43:54 -10713.678630] FAST spr round 2 (radius: 25) [16:45:08 -10435.814912] FAST spr round 3 (radius: 25) [16:46:19 -10367.195185] FAST spr round 4 (radius: 25) [16:47:29 -10365.709564] FAST spr round 5 (radius: 25) [16:48:39 -10365.707395] Model parameter optimization (eps = 1.000000) [16:48:45 -10365.046929] SLOW spr round 1 (radius: 5) [16:49:58 -10362.481269] SLOW spr round 2 (radius: 5) [16:51:10 -10362.240078] SLOW spr round 3 (radius: 5) [16:52:20 -10362.240005] SLOW spr round 4 (radius: 10) [16:53:37 -10346.447061] SLOW spr round 5 (radius: 5) [16:54:57 -10341.502814] SLOW spr round 6 (radius: 5) [16:56:10 -10341.181987] SLOW spr round 7 (radius: 5) [16:57:23 -10341.123296] SLOW spr round 8 (radius: 10) [16:58:41 -10341.123134] SLOW spr round 9 (radius: 15) [17:00:15 -10341.123017] SLOW spr round 10 (radius: 20) [17:02:03 -10339.705453] SLOW spr round 11 (radius: 5) [17:03:27 -10339.705293] SLOW spr round 12 (radius: 10) [17:04:52 -10339.559069] SLOW spr round 13 (radius: 5) [17:06:09 -10339.559053] SLOW spr round 14 (radius: 10) [17:07:23 -10339.456936] SLOW spr round 15 (radius: 5) [17:08:40 -10339.128095] SLOW spr round 16 (radius: 5) [17:09:52 -10339.128091] SLOW spr round 17 (radius: 10) [17:11:07 -10339.128091] SLOW spr round 18 (radius: 15) [17:12:39 -10339.128083] SLOW spr round 19 (radius: 20) [17:14:27 -10339.128012] SLOW spr round 20 (radius: 25) [17:16:34 -10331.908604] SLOW spr round 21 (radius: 5) [17:17:58 -10329.666177] SLOW spr round 22 (radius: 5) [17:19:17 -10327.430574] SLOW spr round 23 (radius: 5) [17:20:29 -10327.387991] SLOW spr round 24 (radius: 10) [17:21:43 -10327.387987] SLOW spr round 25 (radius: 15) [17:23:15 -10314.187043] SLOW spr round 26 (radius: 5) [17:24:40 -10263.973742] SLOW spr round 27 (radius: 5) [17:25:56 -10219.236723] SLOW spr round 28 (radius: 5) [17:27:08 -10219.194645] SLOW spr round 29 (radius: 10) [17:28:22 -10219.194645] SLOW spr round 30 (radius: 15) [17:29:52 -10219.194645] SLOW spr round 31 (radius: 20) [17:31:37 -10219.194641] SLOW spr round 32 (radius: 25) [17:33:42 -10219.194625] Model parameter optimization (eps = 0.100000) [17:33:50] ML tree search #17, logLikelihood: -10218.933640 [17:33:50 -58744.074337] Initial branch length optimization [17:33:51 -48729.280544] Model parameter optimization (eps = 10.000000) [17:34:10 -48691.525661] AUTODETECT spr round 1 (radius: 5) [17:35:24 -30499.527849] AUTODETECT spr round 2 (radius: 10) [17:36:45 -22346.461495] AUTODETECT spr round 3 (radius: 15) [17:38:19 -16652.086451] AUTODETECT spr round 4 (radius: 20) [17:39:55 -14524.014793] AUTODETECT spr round 5 (radius: 25) [17:41:44 -13158.958118] SPR radius for FAST iterations: 25 (autodetect) [17:41:44 -13158.958118] Model parameter optimization (eps = 3.000000) [17:41:59 -13152.838440] FAST spr round 1 (radius: 25) [17:43:24 -10624.352068] FAST spr round 2 (radius: 25) [17:44:41 -10486.317636] FAST spr round 3 (radius: 25) [17:45:55 -10473.876358] FAST spr round 4 (radius: 25) [17:47:09 -10473.874137] Model parameter optimization (eps = 1.000000) [17:47:20 -10472.816725] SLOW spr round 1 (radius: 5) [17:48:32 -10468.788807] SLOW spr round 2 (radius: 5) [17:49:43 -10468.485647] SLOW spr round 3 (radius: 5) [17:50:54 -10468.485329] SLOW spr round 4 (radius: 10) [17:52:12 -10461.981480] SLOW spr round 5 (radius: 5) [17:53:31 -10460.458671] SLOW spr round 6 (radius: 5) [17:54:46 -10460.457764] SLOW spr round 7 (radius: 10) [17:56:03 -10459.397867] SLOW spr round 8 (radius: 5) [17:57:22 -10459.397427] SLOW spr round 9 (radius: 10) [17:58:40 -10459.397353] SLOW spr round 10 (radius: 15) [18:00:13 -10459.397287] SLOW spr round 11 (radius: 20) [18:02:02 -10435.256034] SLOW spr round 12 (radius: 5) [18:03:26 -10424.433407] SLOW spr round 13 (radius: 5) [18:04:45 -10416.751300] SLOW spr round 14 (radius: 5) [18:06:00 -10361.049935] SLOW spr round 15 (radius: 5) [18:07:13 -10343.077483] SLOW spr round 16 (radius: 5) [18:08:25 -10343.077380] SLOW spr round 17 (radius: 10) [18:09:42 -10342.989684] SLOW spr round 18 (radius: 15) [18:11:12 -10342.989493] SLOW spr round 19 (radius: 20) [18:12:59 -10342.989489] SLOW spr round 20 (radius: 25) [18:15:04 -10336.486914] SLOW spr round 21 (radius: 5) [18:16:28 -10336.486841] SLOW spr round 22 (radius: 10) [18:17:50 -10336.042527] SLOW spr round 23 (radius: 5) [18:19:07 -10336.042517] SLOW spr round 24 (radius: 10) [18:20:23 -10336.042512] SLOW spr round 25 (radius: 15) [18:21:53 -10336.042510] SLOW spr round 26 (radius: 20) [18:23:39 -10336.042507] SLOW spr round 27 (radius: 25) [18:25:42 -10336.042504] Model parameter optimization (eps = 0.100000) [18:25:47] ML tree search #18, logLikelihood: -10336.001082 [18:25:47 -58825.051659] Initial branch length optimization [18:25:48 -48588.683942] Model parameter optimization (eps = 10.000000) [18:26:06 -48555.447731] AUTODETECT spr round 1 (radius: 5) [18:27:23 -30688.094155] AUTODETECT spr round 2 (radius: 10) [18:28:45 -22009.550277] AUTODETECT spr round 3 (radius: 15) [18:30:13 -18577.493968] AUTODETECT spr round 4 (radius: 20) [18:31:48 -16282.890837] AUTODETECT spr round 5 (radius: 25) [18:33:32 -14821.402057] SPR radius for FAST iterations: 25 (autodetect) [18:33:32 -14821.402057] Model parameter optimization (eps = 3.000000) [18:33:47 -14805.485729] FAST spr round 1 (radius: 25) [18:35:13 -11684.679625] FAST spr round 2 (radius: 25) [18:36:28 -11239.266123] FAST spr round 3 (radius: 25) [18:37:41 -11197.108695] FAST spr round 4 (radius: 25) [18:38:55 -11186.032095] FAST spr round 5 (radius: 25) [18:40:08 -11179.624741] FAST spr round 6 (radius: 25) [18:41:20 -11179.623967] Model parameter optimization (eps = 1.000000) [18:41:27 -11178.819028] SLOW spr round 1 (radius: 5) [18:42:39 -11177.600598] SLOW spr round 2 (radius: 5) [18:43:54 -11177.546350] SLOW spr round 3 (radius: 10) [18:45:12 -11169.776373] SLOW spr round 4 (radius: 5) [18:46:32 -11166.148236] SLOW spr round 5 (radius: 5) [18:47:48 -11166.144555] SLOW spr round 6 (radius: 10) [18:49:06 -11166.144449] SLOW spr round 7 (radius: 15) [18:50:39 -11145.666208] SLOW spr round 8 (radius: 5) [18:52:03 -11142.291658] SLOW spr round 9 (radius: 5) [18:53:22 -11142.043264] SLOW spr round 10 (radius: 5) [18:54:34 -11142.040219] SLOW spr round 11 (radius: 10) [18:55:50 -11137.012667] SLOW spr round 12 (radius: 5) [18:57:10 -11137.011762] SLOW spr round 13 (radius: 10) [18:58:26 -11137.011658] SLOW spr round 14 (radius: 15) [18:59:55 -11103.016018] SLOW spr round 15 (radius: 5) [19:01:19 -11095.059669] SLOW spr round 16 (radius: 5) [19:02:38 -11077.688218] SLOW spr round 17 (radius: 5) [19:03:52 -11077.686130] SLOW spr round 18 (radius: 10) [19:05:08 -11077.685969] SLOW spr round 19 (radius: 15) [19:06:43 -11044.164863] SLOW spr round 20 (radius: 5) [19:08:08 -10905.639150] SLOW spr round 21 (radius: 5) [19:09:24 -10711.518004] SLOW spr round 22 (radius: 5) [19:10:39 -10650.975089] SLOW spr round 23 (radius: 5) [19:11:52 -10648.580447] SLOW spr round 24 (radius: 5) [19:13:02 -10648.580438] SLOW spr round 25 (radius: 10) [19:14:18 -10577.537025] SLOW spr round 26 (radius: 5) [19:15:40 -10535.095958] SLOW spr round 27 (radius: 5) [19:16:52 -10535.095826] SLOW spr round 28 (radius: 10) [19:18:08 -10533.520421] SLOW spr round 29 (radius: 5) [19:19:26 -10533.520391] SLOW spr round 30 (radius: 10) [19:20:42 -10533.520391] SLOW spr round 31 (radius: 15) [19:22:12 -10470.794964] SLOW spr round 32 (radius: 5) [19:23:35 -10387.884163] SLOW spr round 33 (radius: 5) [19:24:52 -10371.336752] SLOW spr round 34 (radius: 5) [19:26:03 -10371.336682] SLOW spr round 35 (radius: 10) [19:27:18 -10369.248064] SLOW spr round 36 (radius: 5) [19:28:36 -10369.247693] SLOW spr round 37 (radius: 10) [19:29:51 -10369.247690] SLOW spr round 38 (radius: 15) [19:31:19 -10369.247679] SLOW spr round 39 (radius: 20) [19:32:59 -10369.247573] SLOW spr round 40 (radius: 25) [19:34:49 -10365.243634] SLOW spr round 41 (radius: 5) [19:36:14 -10365.195022] SLOW spr round 42 (radius: 10) [19:37:37 -10365.194921] SLOW spr round 43 (radius: 15) [19:39:05 -10365.194916] SLOW spr round 44 (radius: 20) [19:40:42 -10365.194913] SLOW spr round 45 (radius: 25) [19:42:27 -10365.194913] Model parameter optimization (eps = 0.100000) [19:42:36] ML tree search #19, logLikelihood: -10364.950804 [19:42:36 -58355.495002] Initial branch length optimization [19:42:38 -48252.339319] Model parameter optimization (eps = 10.000000) [19:42:56 -48209.190466] AUTODETECT spr round 1 (radius: 5) [19:44:12 -30637.827785] AUTODETECT spr round 2 (radius: 10) [19:45:32 -22461.872074] AUTODETECT spr round 3 (radius: 15) [19:47:00 -18726.439984] AUTODETECT spr round 4 (radius: 20) [19:48:42 -15550.047161] AUTODETECT spr round 5 (radius: 25) [19:50:28 -14105.374725] SPR radius for FAST iterations: 25 (autodetect) [19:50:28 -14105.374725] Model parameter optimization (eps = 3.000000) [19:50:40 -14092.999881] FAST spr round 1 (radius: 25) [19:52:01 -10526.121125] FAST spr round 2 (radius: 25) [19:53:15 -10279.161723] FAST spr round 3 (radius: 25) [19:54:26 -10267.446445] FAST spr round 4 (radius: 25) [19:55:36 -10261.428234] FAST spr round 5 (radius: 25) [19:56:47 -10261.424750] Model parameter optimization (eps = 1.000000) [19:56:53 -10260.776711] SLOW spr round 1 (radius: 5) [19:58:05 -10259.350997] SLOW spr round 2 (radius: 5) [19:59:16 -10259.332397] SLOW spr round 3 (radius: 10) [20:00:34 -10255.960813] SLOW spr round 4 (radius: 5) [20:01:52 -10248.502366] SLOW spr round 5 (radius: 5) [20:03:06 -10246.927363] SLOW spr round 6 (radius: 5) [20:04:17 -10246.775334] SLOW spr round 7 (radius: 5) [20:05:25 -10246.775212] SLOW spr round 8 (radius: 10) [20:06:43 -10244.059561] SLOW spr round 9 (radius: 5) [20:08:02 -10240.920471] SLOW spr round 10 (radius: 5) [20:09:12 -10240.919948] SLOW spr round 11 (radius: 10) [20:10:27 -10240.919941] SLOW spr round 12 (radius: 15) [20:11:58 -10238.038521] SLOW spr round 13 (radius: 5) [20:13:20 -10238.038461] SLOW spr round 14 (radius: 10) [20:14:40 -10236.692692] SLOW spr round 15 (radius: 5) [20:15:58 -10234.056757] SLOW spr round 16 (radius: 5) [20:17:09 -10234.054142] SLOW spr round 17 (radius: 10) [20:18:23 -10234.053711] SLOW spr round 18 (radius: 15) [20:19:56 -10233.584586] SLOW spr round 19 (radius: 5) [20:21:18 -10233.584569] SLOW spr round 20 (radius: 10) [20:22:35 -10233.584566] SLOW spr round 21 (radius: 15) [20:24:06 -10233.584553] SLOW spr round 22 (radius: 20) [20:25:54 -10233.584546] SLOW spr round 23 (radius: 25) [20:28:04 -10230.678673] SLOW spr round 24 (radius: 5) [20:29:28 -10230.678438] SLOW spr round 25 (radius: 10) [20:30:53 -10230.678255] SLOW spr round 26 (radius: 15) [20:32:25 -10230.678069] SLOW spr round 27 (radius: 20) [20:34:14 -10230.677893] SLOW spr round 28 (radius: 25) [20:36:27 -10230.677706] Model parameter optimization (eps = 0.100000) [20:36:32] ML tree search #20, logLikelihood: -10230.583921 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.249071,0.328355) (0.322717,0.559659) (0.321131,1.281315) (0.107082,3.045669) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Final LogLikelihood: -10218.933640 AIC score: 24419.867281 / AICc score: 7956563.867281 / BIC score: 28452.342497 Free parameters (model + branch lengths): 1991 WARNING: Number of free parameters (K=1991) is larger than alignment size (n=56). This might lead to overfitting and compromise tree inference results! WARNING: Best ML tree contains 1 near-zero branches! Best ML tree with collapsed near-zero branches saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/3_mltree/O60216.raxml.bestTreeCollapsed Best ML tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/3_mltree/O60216.raxml.bestTree All ML trees saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/3_mltree/O60216.raxml.mlTrees Optimized model saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/3_mltree/O60216.raxml.bestModel Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O60216/3_mltree/O60216.raxml.log Analysis started: 04-Jul-2021 15:17:47 / finished: 05-Jul-2021 11:54:19 Elapsed time: 74192.370 seconds Consumed energy: 6593.989 Wh (= 33 km in an electric car, or 165 km with an e-scooter!)