RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 06-Jul-2021 01:09:30 as follows: raxml-ng --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O43525/2_msa/O43525_trimmed_msa.fasta --data-type AA --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O43525/3_mltree/O43525 --seed 2 --threads 4 --tree rand{20} pars{20} Analysis options: run mode: ML tree search start tree(s): random (20) random seed: 2 tip-inner: OFF pattern compression: ON per-rate scalers: OFF site repeats: ON fast spr radius: AUTO spr subtree cutoff: 1.000000 branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O43525/2_msa/O43525_trimmed_msa.fasta [00:00:00] Loaded alignment with 940 taxa and 204 sites WARNING: Sequences tr_B4Q9Q0_B4Q9Q0_DROSI_7240 and sp_P17972_KCNAW_DROME_7227 are exactly identical! WARNING: Sequences tr_A0A2R8QD79_A0A2R8QD79_DANRE_7955 and tr_F1RB62_F1RB62_DANRE_7955 are exactly identical! WARNING: Sequences tr_A0A2R8QGH1_A0A2R8QGH1_DANRE_7955 and tr_F1RE25_F1RE25_DANRE_7955 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_G1NM43_G1NM43_MELGA_9103 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_U3IS72_U3IS72_ANAPL_8839 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A0Q3VYD6_A0A0Q3VYD6_AMAAE_12930 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A093PNE5_A0A093PNE5_9PASS_328815 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A091W3N5_A0A091W3N5_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A087QVC1_A0A087QVC1_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A093KEJ2_A0A093KEJ2_STRCA_441894 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A091VCP0_A0A091VCP0_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A091GCD4_A0A091GCD4_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A0A0A3C9_A0A0A0A3C9_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A2I0MTR3_A0A2I0MTR3_COLLI_8932 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A091HS19_A0A091HS19_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A3Q0FH56_A0A3Q0FH56_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A1V4JMG3_A0A1V4JMG3_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_K7FP05_K7FP05_PELSI_13735 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_G3VFJ2_G3VFJ2_SARHA_9305 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A091EE07_A0A091EE07_CORBR_85066 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A091IWL2_A0A091IWL2_EGRGA_188379 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A093PYV1_A0A093PYV1_9PASS_328815 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A091UJX3_A0A091UJX3_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A087RK45_A0A087RK45_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A093HNK9_A0A093HNK9_STRCA_441894 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A091W852_A0A091W852_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A099ZSZ2_A0A099ZSZ2_TINGU_94827 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A091FQJ8_A0A091FQJ8_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A0A0AZB1_A0A0A0AZB1_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A093GJQ3_A0A093GJQ3_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A091HKB8_A0A091HKB8_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A226N7H6_A0A226N7H6_CALSU_9009 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A226P256_A0A226P256_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and sp_Q8K3F6_KCNQ3_MOUSE_10090 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_M3XQS8_M3XQS8_MUSPF_9669 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2I3HPQ0_A0A2I3HPQ0_NOMLE_61853 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2I2Y6I5_A0A2I2Y6I5_GORGO_9595 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_H2PR82_H2PR82_PONAB_9601 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_G1NJK4_G1NJK4_MELGA_9103 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_G1U889_G1U889_RABIT_9986 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_F1PVZ4_F1PVZ4_CANLF_9615 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_H2QWQ8_H2QWQ8_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_F6QEV2_F6QEV2_HORSE_9796 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and sp_O88944_KCNQ3_RAT_10116 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_I3MGR4_I3MGR4_ICTTR_43179 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_H0X7V7_H0X7V7_OTOGA_30611 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and sp_O43525_KCNQ3_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_F7DI95_F7DI95_MACMU_9544 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_G5C6Q1_G5C6Q1_HETGA_10181 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_K7FEF1_K7FEF1_PELSI_13735 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_G3SWQ3_G3SWQ3_LOXAF_9785 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_G3VZW6_G3VZW6_SARHA_9305 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_H0ZQN1_H0ZQN1_TAEGU_59729 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_F7HWT6_F7HWT6_CALJA_9483 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_F1RRT9_F1RRT9_PIG_9823 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_G1M2U4_G1M2U4_AILME_9646 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_G7PCU7_G7PCU7_MACFA_9541 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and sp_P58126_KCNQ3_BOVIN_9913 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2I2UJ25_A0A2I2UJ25_FELCA_9685 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_U3I8X0_U3I8X0_ANAPL_8839 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2I3MAZ8_A0A2I3MAZ8_PAPAN_9555 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A0D9RC24_A0A0D9RC24_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A091F6N3_A0A091F6N3_CORBR_85066 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A091JFB6_A0A091JFB6_EGRGA_188379 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A093S200_A0A093S200_9PASS_328815 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A091VGC2_A0A091VGC2_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A087QRU7_A0A087QRU7_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A093J701_A0A093J701_STRCA_441894 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A091WKW8_A0A091WKW8_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A099Z4M4_A0A099Z4M4_TINGU_94827 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A091G0N2_A0A091G0N2_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A0A0A824_A0A0A0A824_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2I0MXE7_A0A2I0MXE7_COLLI_8932 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A093G4N3_A0A093G4N3_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A091HPU0_A0A091HPU0_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A1S3FW23_A0A1S3FW23_DIPOR_10020 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A3Q0DLV0_A0A3Q0DLV0_TARSY_1868482 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A1U7S030_A0A1U7S030_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A1U8C684_A0A1U8C684_MESAU_10036 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A1V4KVP2_A0A1V4KVP2_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2K5NHH6_A0A2K5NHH6_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2K6E1G7_A0A2K6E1G7_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2K5XGJ4_A0A2K5XGJ4_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2R9BLA0_A0A2R9BLA0_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2U3WWZ0_A0A2U3WWZ0_ODORO_9708 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2U3Z492_A0A2U3Z492_LEPWE_9713 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2Y9DFB2_A0A2Y9DFB2_TRIMA_127582 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2Y9JAG9_A0A2Y9JAG9_ENHLU_391180 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2Y9LRP7_A0A2Y9LRP7_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A384AP87_A0A384AP87_BALAS_310752 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_G1N3R9_G1N3R9_MELGA_9103 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_G1KEV7_G1KEV7_ANOCA_28377 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_K7FZ48_K7FZ48_PELSI_13735 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_H0ZAR3_H0ZAR3_TAEGU_59729 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_U3K756_U3K756_FICAL_59894 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_U3IL20_U3IL20_ANAPL_8839 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A151NYJ8_A0A151NYJ8_ALLMI_8496 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A091E7U8_A0A091E7U8_CORBR_85066 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A091JHE4_A0A091JHE4_EGRGA_188379 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A093PTR8_A0A093PTR8_9PASS_328815 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A091VUC1_A0A091VUC1_NIPNI_128390 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A087QRQ2_A0A087QRQ2_APTFO_9233 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A093J1S3_A0A093J1S3_STRCA_441894 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A099ZHN2_A0A099ZHN2_TINGU_94827 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A091G6F6_A0A091G6F6_9AVES_55661 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A091I973_A0A091I973_CALAN_9244 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A1U7RWZ2_A0A1U7RWZ2_ALLSI_38654 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A1V4KKE6_A0A1V4KKE6_PATFA_372326 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A218US12_A0A218US12_9PASE_299123 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_G3RC31_G3RC31_GORGO_9595 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and sp_Q9MYS6_KCNQ1_RABIT_9986 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A2I3TFU0_A0A2I3TFU0_PANTR_9598 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and sp_Q9Z0N7_KCNQ1_RAT_10116 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and sp_O70344_KCNQ1_CAVPO_10141 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and sp_P51787_KCNQ1_HUMAN_9606 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_G7PNX3_G7PNX3_MACFA_9541 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A096NDD2_A0A096NDD2_PAPAN_9555 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A0D9RB34_A0A0D9RB34_CHLSB_60711 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A1U7Q2W7_A0A1U7Q2W7_MESAU_10036 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A2K5MPS2_A0A2K5MPS2_CERAT_9531 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A2K6DYU8_A0A2K6DYU8_MACNE_9545 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A2K6AIU9_A0A2K6AIU9_MANLE_9568 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A2Y9PLZ2_A0A2Y9PLZ2_DELLE_9749 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_M3XZ34_M3XZ34_MUSPF_9669 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_G1QKC9_G1QKC9_NOMLE_61853 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_G1PTW5_G1PTW5_MYOLU_59463 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_G3R701_G3R701_GORGO_9595 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_F1PM64_F1PM64_CANLF_9615 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2I3S1D1_A0A2I3S1D1_PANTR_9598 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_W5PN41_W5PN41_SHEEP_9940 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_F1LY25_F1LY25_RAT_10116 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A287D6X1_A0A287D6X1_ICTTR_43179 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_H0UT79_H0UT79_CAVPO_10141 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and sp_Q9NR82_KCNQ5_HUMAN_9606 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_F6Q5P1_F6Q5P1_MACMU_9544 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_G5ALU0_G5ALU0_HETGA_10181 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_F7GQY9_F7GQY9_CALJA_9483 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A287BH80_A0A287BH80_PIG_9823 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_G1LMS1_G1LMS1_AILME_9646 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_G7P303_G7P303_MACFA_9541 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_F1MPK2_F1MPK2_BOVIN_9913 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_M3XDV8_M3XDV8_FELCA_9685 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2I3N4U3_A0A2I3N4U3_PAPAN_9555 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A1S3GJN0_A0A1S3GJN0_DIPOR_10020 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A1U7QEM8_A0A1U7QEM8_MESAU_10036 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2K5L5Z3_A0A2K5L5Z3_CERAT_9531 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2K6DCZ5_A0A2K6DCZ5_MACNE_9545 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2K5Z353_A0A2K5Z353_MANLE_9568 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2R9C3J4_A0A2R9C3J4_PANPA_9597 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2U4AV51_A0A2U4AV51_TURTR_9739 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2U3WUM5_A0A2U3WUM5_ODORO_9708 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2Y9DVW9_A0A2Y9DVW9_TRIMA_127582 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2Y9JZG6_A0A2Y9JZG6_ENHLU_391180 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2Y9PRV4_A0A2Y9PRV4_DELLE_9749 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2Y9TD28_A0A2Y9TD28_PHYCD_9755 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A384BLX5_A0A384BLX5_URSMA_29073 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A383YVK8_A0A383YVK8_BALAS_310752 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_A0A1U7R1Q5_A0A1U7R1Q5_MESAU_10036 are exactly identical! WARNING: Sequences tr_W5JDT2_W5JDT2_ANODA_43151 and tr_Q16MJ7_Q16MJ7_AEDAE_7159 are exactly identical! WARNING: Sequences tr_M3Y169_M3Y169_MUSPF_9669 and tr_J9PA96_J9PA96_CANLF_9615 are exactly identical! WARNING: Sequences tr_M3Y169_M3Y169_MUSPF_9669 and tr_G1L5M3_G1L5M3_AILME_9646 are exactly identical! WARNING: Sequences tr_M3Y169_M3Y169_MUSPF_9669 and tr_A0A337SCU5_A0A337SCU5_FELCA_9685 are exactly identical! WARNING: Sequences tr_M3Y169_M3Y169_MUSPF_9669 and sp_O97531_KCNQ1_FELCA_9685 are exactly identical! WARNING: Sequences tr_M3Y169_M3Y169_MUSPF_9669 and tr_A0A2U3W6S4_A0A2U3W6S4_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3Y169_M3Y169_MUSPF_9669 and tr_A0A2U3XY29_A0A2U3XY29_LEPWE_9713 are exactly identical! WARNING: Sequences tr_M3Y169_M3Y169_MUSPF_9669 and tr_A0A2Y9JQ22_A0A2Y9JQ22_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3Y169_M3Y169_MUSPF_9669 and tr_A0A384CTW3_A0A384CTW3_URSMA_29073 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_F1PER0_F1PER0_CANLF_9615 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_F6WQP9_F6WQP9_MONDO_13616 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_W5PN83_W5PN83_SHEEP_9940 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_G3TZD6_G3TZD6_LOXAF_9785 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_G1L416_G1L416_AILME_9646 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_F1MCH6_F1MCH6_BOVIN_9913 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A337SQB4_A0A337SQB4_FELCA_9685 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A1S3WDJ1_A0A1S3WDJ1_ERIEU_9365 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A2U3WMF7_A0A2U3WMF7_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A2Y9D9L0_A0A2Y9D9L0_TRIMA_127582 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A2Y9IT30_A0A2Y9IT30_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A384ADR9_A0A384ADR9_BALAS_310752 are exactly identical! WARNING: Sequences tr_M3YRN7_M3YRN7_MUSPF_9669 and tr_G1P8V8_G1P8V8_MYOLU_59463 are exactly identical! WARNING: Sequences tr_M3YRN7_M3YRN7_MUSPF_9669 and tr_F1Q3A1_F1Q3A1_CANLF_9615 are exactly identical! WARNING: Sequences tr_M3YRN7_M3YRN7_MUSPF_9669 and tr_H0X7C2_H0X7C2_OTOGA_30611 are exactly identical! WARNING: Sequences tr_M3YRN7_M3YRN7_MUSPF_9669 and tr_G3U0A5_G3U0A5_LOXAF_9785 are exactly identical! WARNING: Sequences tr_M3YRN7_M3YRN7_MUSPF_9669 and tr_F1N6U1_F1N6U1_BOVIN_9913 are exactly identical! WARNING: Sequences tr_M3YRN7_M3YRN7_MUSPF_9669 and tr_L5L799_L5L799_PTEAL_9402 are exactly identical! WARNING: Sequences tr_M3YRN7_M3YRN7_MUSPF_9669 and tr_M3VZD7_M3VZD7_FELCA_9685 are exactly identical! WARNING: Sequences tr_M3YRN7_M3YRN7_MUSPF_9669 and tr_A0A1S3AJF0_A0A1S3AJF0_ERIEU_9365 are exactly identical! WARNING: Sequences tr_M3YRN7_M3YRN7_MUSPF_9669 and tr_A0A1S3F8Q3_A0A1S3F8Q3_DIPOR_10020 are exactly identical! WARNING: Sequences tr_M3YRN7_M3YRN7_MUSPF_9669 and tr_A0A2U3WDU3_A0A2U3WDU3_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3YRN7_M3YRN7_MUSPF_9669 and tr_A0A2U3YU70_A0A2U3YU70_LEPWE_9713 are exactly identical! WARNING: Sequences tr_M3YRN7_M3YRN7_MUSPF_9669 and tr_A0A2Y9J3J2_A0A2Y9J3J2_ENHLU_391180 are exactly identical! WARNING: Sequences tr_A1Z856_A1Z856_DROME_7227 and tr_B4HME1_B4HME1_DROSE_7238 are exactly identical! WARNING: Sequences tr_A1Z856_A1Z856_DROME_7227 and tr_A0A0R3NMM8_A0A0R3NMM8_DROPS_46245 are exactly identical! WARNING: Sequences tr_A1Z856_A1Z856_DROME_7227 and tr_B4GBS6_B4GBS6_DROPE_7234 are exactly identical! WARNING: Sequences tr_A1Z856_A1Z856_DROME_7227 and tr_A0A1W4VQN6_A0A1W4VQN6_DROFC_30025 are exactly identical! WARNING: Sequences tr_A0A3B3HS90_A0A3B3HS90_ORYLA_8090 and tr_I3JQF8_I3JQF8_ORENI_8128 are exactly identical! WARNING: Sequences tr_A0A3B3HS90_A0A3B3HS90_ORYLA_8090 and tr_A0A2I4CKF1_A0A2I4CKF1_9TELE_52670 are exactly identical! WARNING: Sequences tr_B4J6V5_B4J6V5_DROGR_7222 and tr_B4LKB4_B4LKB4_DROVI_7244 are exactly identical! WARNING: Sequences tr_B4JQJ2_B4JQJ2_DROGR_7222 and tr_A0A0Q9WC30_A0A0Q9WC30_DROVI_7244 are exactly identical! WARNING: Sequences tr_B4JQJ2_B4JQJ2_DROGR_7222 and tr_A0A0Q9XGG7_A0A0Q9XGG7_DROMO_7230 are exactly identical! WARNING: Sequences tr_B4JQJ2_B4JQJ2_DROGR_7222 and tr_A0A0M5J915_A0A0M5J915_DROBS_30019 are exactly identical! WARNING: Sequences tr_G1PS86_G1PS86_MYOLU_59463 and tr_A0A091DFP0_A0A091DFP0_FUKDA_885580 are exactly identical! WARNING: Sequences tr_G3HGY7_G3HGY7_CRIGR_10029 and tr_G3QZ98_G3QZ98_GORGO_9595 are exactly identical! WARNING: Sequences tr_G3HGY7_G3HGY7_CRIGR_10029 and tr_H2QKS4_H2QKS4_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3HGY7_G3HGY7_CRIGR_10029 and sp_O88943_KCNQ2_RAT_10116 are exactly identical! WARNING: Sequences tr_G3HGY7_G3HGY7_CRIGR_10029 and tr_A0A287DBX6_A0A287DBX6_ICTTR_43179 are exactly identical! WARNING: Sequences tr_G3HGY7_G3HGY7_CRIGR_10029 and tr_H0X1I7_H0X1I7_OTOGA_30611 are exactly identical! WARNING: Sequences tr_G3HGY7_G3HGY7_CRIGR_10029 and tr_A0A286XK97_A0A286XK97_CAVPO_10141 are exactly identical! WARNING: Sequences tr_G3HGY7_G3HGY7_CRIGR_10029 and sp_O43526_KCNQ2_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3HGY7_G3HGY7_CRIGR_10029 and tr_F7ASD7_F7ASD7_MACMU_9544 are exactly identical! WARNING: Sequences tr_G3HGY7_G3HGY7_CRIGR_10029 and tr_G5C8D4_G5C8D4_HETGA_10181 are exactly identical! WARNING: Sequences tr_G3HGY7_G3HGY7_CRIGR_10029 and tr_F7CY49_F7CY49_CALJA_9483 are exactly identical! WARNING: Sequences tr_G3HGY7_G3HGY7_CRIGR_10029 and tr_A0A2I3MKQ2_A0A2I3MKQ2_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G3HGY7_G3HGY7_CRIGR_10029 and tr_A0A091EP95_A0A091EP95_FUKDA_885580 are exactly identical! WARNING: Sequences tr_G3HGY7_G3HGY7_CRIGR_10029 and tr_A0A0D9RUZ8_A0A0D9RUZ8_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G3HGY7_G3HGY7_CRIGR_10029 and tr_A0A3Q0DLB6_A0A3Q0DLB6_TARSY_1868482 are exactly identical! WARNING: Sequences tr_G3HGY7_G3HGY7_CRIGR_10029 and tr_A0A1U8C944_A0A1U8C944_MESAU_10036 are exactly identical! WARNING: Sequences tr_G3HGY7_G3HGY7_CRIGR_10029 and tr_A0A2K5L1K5_A0A2K5L1K5_CERAT_9531 are exactly identical! WARNING: Sequences tr_G3HGY7_G3HGY7_CRIGR_10029 and tr_A0A2K6C5U6_A0A2K6C5U6_MACNE_9545 are exactly identical! WARNING: Sequences tr_G3HGY7_G3HGY7_CRIGR_10029 and tr_A0A2K5ZMY4_A0A2K5ZMY4_MANLE_9568 are exactly identical! WARNING: Sequences tr_G3HGY7_G3HGY7_CRIGR_10029 and tr_A0A2R9AU86_A0A2R9AU86_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3R8M9_G3R8M9_GORGO_9595 and tr_H2Q594_H2Q594_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3R8M9_G3R8M9_GORGO_9595 and sp_P22460_KCNA5_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3RZZ7_G3RZZ7_GORGO_9595 and tr_G1TAC8_G1TAC8_RABIT_9986 are exactly identical! WARNING: Sequences tr_G3RZZ7_G3RZZ7_GORGO_9595 and sp_P56696_KCNQ4_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3RZZ7_G3RZZ7_GORGO_9595 and tr_F7CRG2_F7CRG2_MACMU_9544 are exactly identical! WARNING: Sequences tr_G3RZZ7_G3RZZ7_GORGO_9595 and tr_F7I302_F7I302_CALJA_9483 are exactly identical! WARNING: Sequences tr_G3RZZ7_G3RZZ7_GORGO_9595 and tr_A0A0D9S7M2_A0A0D9S7M2_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G3RZZ7_G3RZZ7_GORGO_9595 and tr_A0A2K6AY37_A0A2K6AY37_MACNE_9545 are exactly identical! WARNING: Sequences tr_G3RZZ7_G3RZZ7_GORGO_9595 and tr_A0A2K5YK13_A0A2K5YK13_MANLE_9568 are exactly identical! WARNING: Sequences tr_G3RZZ7_G3RZZ7_GORGO_9595 and tr_A0A2R9C497_A0A2R9C497_PANPA_9597 are exactly identical! WARNING: Sequences tr_C3YUU7_C3YUU7_BRAFL_7739 and tr_K7FXZ1_K7FXZ1_PELSI_13735 are exactly identical! WARNING: Sequences tr_C3YUU7_C3YUU7_BRAFL_7739 and tr_Q1DGP7_Q1DGP7_AEDAE_7159 are exactly identical! WARNING: Sequences tr_C3YUU7_C3YUU7_BRAFL_7739 and tr_U3J0S0_U3J0S0_ANAPL_8839 are exactly identical! WARNING: Sequences tr_C3YUU7_C3YUU7_BRAFL_7739 and tr_A0A087Y2G9_A0A087Y2G9_POEFO_48698 are exactly identical! WARNING: Sequences tr_C3YUU7_C3YUU7_BRAFL_7739 and tr_V4C0B6_V4C0B6_LOTGI_225164 are exactly identical! WARNING: Sequences tr_G1MZD8_G1MZD8_MELGA_9103 and tr_H0XA62_H0XA62_OTOGA_30611 are exactly identical! WARNING: Sequences tr_G1MZD8_G1MZD8_MELGA_9103 and tr_H0ZYJ0_H0ZYJ0_TAEGU_59729 are exactly identical! WARNING: Sequences tr_G1MZD8_G1MZD8_MELGA_9103 and tr_A0A2I0LHM6_A0A2I0LHM6_COLLI_8932 are exactly identical! WARNING: Sequences tr_G1MZD8_G1MZD8_MELGA_9103 and tr_A0A1U7T3W6_A0A1U7T3W6_TARSY_1868482 are exactly identical! WARNING: Sequences tr_G1MZD8_G1MZD8_MELGA_9103 and tr_A0A226N5Q9_A0A226N5Q9_CALSU_9009 are exactly identical! WARNING: Sequences tr_G1MZD8_G1MZD8_MELGA_9103 and tr_A0A226NW85_A0A226NW85_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A0R3NYT9_A0A0R3NYT9_DROPS_46245 and tr_B4G9C6_B4G9C6_DROPE_7234 are exactly identical! WARNING: Sequences tr_A0A0R3NYT9_A0A0R3NYT9_DROPS_46245 and tr_A0A1W4UU67_A0A1W4UU67_DROFC_30025 are exactly identical! WARNING: Sequences tr_F7B5A9_F7B5A9_MONDO_13616 and tr_G3W6Y4_G3W6Y4_SARHA_9305 are exactly identical! WARNING: Sequences tr_A0A3B5QY99_A0A3B5QY99_XIPMA_8083 and tr_A0A087XX80_A0A087XX80_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A3B5RB76_A0A3B5RB76_XIPMA_8083 and tr_A0A087XE65_A0A087XE65_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4ABE0_M4ABE0_XIPMA_8083 and tr_A0A087YN00_A0A087YN00_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4AC64_M4AC64_XIPMA_8083 and tr_A0A087Y5R7_A0A087Y5R7_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A158NUT7_A0A158NUT7_ATTCE_12957 and tr_F4WE37_F4WE37_ACREC_103372 are exactly identical! WARNING: Sequences tr_A0A158NUT7_A0A158NUT7_ATTCE_12957 and tr_A0A151X3V2_A0A151X3V2_9HYME_64791 are exactly identical! WARNING: Sequences tr_A0A158NUT7_A0A158NUT7_ATTCE_12957 and tr_A0A151IR59_A0A151IR59_9HYME_471704 are exactly identical! WARNING: Sequences tr_A0A158NUT7_A0A158NUT7_ATTCE_12957 and tr_A0A195BBF5_A0A195BBF5_9HYME_520822 are exactly identical! WARNING: Sequences tr_H2T7X8_H2T7X8_TAKRU_31033 and tr_A0A1S3L7J5_A0A1S3L7J5_SALSA_8030 are exactly identical! WARNING: Sequences tr_H2T7X8_H2T7X8_TAKRU_31033 and tr_A0A1S3PPU1_A0A1S3PPU1_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A2H2JJC5_A0A2H2JJC5_CAEJA_281687 and tr_A0A2G5V5Y6_A0A2G5V5Y6_9PELO_1611254 are exactly identical! WARNING: Sequences tr_K7GVR5_K7GVR5_CAEJA_281687 and tr_A0A1I7TIZ7_A0A1I7TIZ7_9PELO_1561998 are exactly identical! WARNING: Sequences tr_A0A0K0J5M2_A0A0K0J5M2_BRUMA_6279 and tr_A0A158PST5_A0A158PST5_BRUPA_6280 are exactly identical! WARNING: Sequences tr_F6WG11_F6WG11_MACMU_9544 and tr_A0A096N9K0_A0A096N9K0_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F6WG11_F6WG11_MACMU_9544 and tr_A0A0D9SCZ2_A0A0D9SCZ2_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F6WG11_F6WG11_MACMU_9544 and tr_A0A2K5KNT8_A0A2K5KNT8_CERAT_9531 are exactly identical! WARNING: Sequences tr_F6WG11_F6WG11_MACMU_9544 and tr_A0A2K5XWN5_A0A2K5XWN5_MANLE_9568 are exactly identical! WARNING: Sequences tr_G5BSU0_G5BSU0_HETGA_10181 and tr_F1N4R0_F1N4R0_BOVIN_9913 are exactly identical! WARNING: Sequences tr_G5BSU0_G5BSU0_HETGA_10181 and tr_A0A1U7TTJ5_A0A1U7TTJ5_TARSY_1868482 are exactly identical! WARNING: Sequences tr_E5SL57_E5SL57_TRISP_6334 and tr_A0A0V0SIY5_A0A0V0SIY5_9BILA_6336 are exactly identical! WARNING: Sequences tr_G3WPG8_G3WPG8_SARHA_9305 and tr_A0A1S3A5P1_A0A1S3A5P1_ERIEU_9365 are exactly identical! WARNING: Sequences tr_H0ZFU9_H0ZFU9_TAEGU_59729 and tr_U3KA98_U3KA98_FICAL_59894 are exactly identical! WARNING: Sequences tr_H0ZFU9_H0ZFU9_TAEGU_59729 and tr_U3J4D5_U3J4D5_ANAPL_8839 are exactly identical! WARNING: Sequences tr_H0ZFU9_H0ZFU9_TAEGU_59729 and tr_A0A2I0MHX8_A0A2I0MHX8_COLLI_8932 are exactly identical! WARNING: Sequences tr_H0ZFU9_H0ZFU9_TAEGU_59729 and tr_A0A1V4JNM5_A0A1V4JNM5_PATFA_372326 are exactly identical! WARNING: Sequences tr_H0ZR24_H0ZR24_TAEGU_59729 and tr_A0A091EWB3_A0A091EWB3_CORBR_85066 are exactly identical! WARNING: Sequences tr_H0ZR24_H0ZR24_TAEGU_59729 and tr_A0A218UVQ9_A0A218UVQ9_9PASE_299123 are exactly identical! WARNING: Sequences tr_H1A400_H1A400_TAEGU_59729 and tr_A0A091EUG7_A0A091EUG7_CORBR_85066 are exactly identical! WARNING: Sequences tr_H1A400_H1A400_TAEGU_59729 and tr_A0A091IZ56_A0A091IZ56_EGRGA_188379 are exactly identical! WARNING: Sequences tr_H1A400_H1A400_TAEGU_59729 and tr_A0A091VK51_A0A091VK51_NIPNI_128390 are exactly identical! WARNING: Sequences tr_H1A5P8_H1A5P8_TAEGU_59729 and tr_A0A218UFM6_A0A218UFM6_9PASE_299123 are exactly identical! WARNING: Sequences tr_G0MQB7_G0MQB7_CAEBE_135651 and tr_G0PET1_G0PET1_CAEBE_135651 are exactly identical! WARNING: Sequences tr_G0MSK2_G0MSK2_CAEBE_135651 and tr_E3LDF0_E3LDF0_CAERE_31234 are exactly identical! WARNING: Sequences tr_G0MSK2_G0MSK2_CAEBE_135651 and tr_A8XC51_A8XC51_CAEBR_6238 are exactly identical! WARNING: Sequences tr_G0MSK2_G0MSK2_CAEBE_135651 and tr_A0A2G5SVC1_A0A2G5SVC1_9PELO_1611254 are exactly identical! WARNING: Sequences tr_E2BJK9_E2BJK9_HARSA_610380 and tr_A0A0L7RK60_A0A0L7RK60_9HYME_597456 are exactly identical! WARNING: Sequences tr_E3LYL8_E3LYL8_CAERE_31234 and tr_A0A261B2E6_A0A261B2E6_9PELO_1503980 are exactly identical! WARNING: Sequences tr_L5JMJ7_L5JMJ7_PTEAL_9402 and tr_A0A0D9RN61_A0A0D9RN61_CHLSB_60711 are exactly identical! WARNING: Sequences tr_T1KV96_T1KV96_TETUR_32264 and tr_T1KZT4_T1KZT4_TETUR_32264 are exactly identical! WARNING: Sequences tr_U3JD26_U3JD26_FICAL_59894 and tr_A0A218UZ09_A0A218UZ09_9PASE_299123 are exactly identical! WARNING: Sequences tr_A0A0K0EUY4_A0A0K0EUY4_STRVS_75913 and tr_A0A0K0E027_A0A0K0E027_STRER_6248 are exactly identical! WARNING: Sequences tr_A0A0K0EUY4_A0A0K0EUY4_STRVS_75913 and tr_A0A090L7Q8_A0A090L7Q8_STRRB_34506 are exactly identical! WARNING: Sequences tr_A0A0K0EUY4_A0A0K0EUY4_STRVS_75913 and tr_A0A0N5BI09_A0A0N5BI09_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A0K0FQB1_A0A0K0FQB1_STRVS_75913 and tr_A0A0N5BH34_A0A0N5BH34_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A151MCA0_A0A151MCA0_ALLMI_8496 and tr_A0A3Q0GIA4_A0A3Q0GIA4_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A151MUD0_A0A151MUD0_ALLMI_8496 and tr_A0A091J5B8_A0A091J5B8_EGRGA_188379 are exactly identical! WARNING: Sequences tr_A0A151PGE8_A0A151PGE8_ALLMI_8496 and tr_A0A3Q0HDS4_A0A3Q0HDS4_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A0Q3M8F0_A0A0Q3M8F0_AMAAE_12930 and tr_A0A226MM62_A0A226MM62_CALSU_9009 are exactly identical! WARNING: Sequences tr_A0A0Q3M8F0_A0A0Q3M8F0_AMAAE_12930 and tr_A0A226P4J5_A0A226P4J5_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A091J2L1_A0A091J2L1_EGRGA_188379 and tr_A0A091UMT2_A0A091UMT2_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091J2L1_A0A091J2L1_EGRGA_188379 and tr_A0A2I0MK22_A0A2I0MK22_COLLI_8932 are exactly identical! WARNING: Sequences tr_A0A091J2L1_A0A091J2L1_EGRGA_188379 and tr_A0A091IMH5_A0A091IMH5_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A091J2L1_A0A091J2L1_EGRGA_188379 and tr_A0A1V4K873_A0A1V4K873_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A091VLI6_A0A091VLI6_NIPNI_128390 and tr_A0A091G6X5_A0A091G6X5_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A091WIM2_A0A091WIM2_OPIHO_30419 and tr_A0A099ZF49_A0A099ZF49_TINGU_94827 are exactly identical! WARNING: Sequences tr_A0A091GK11_A0A091GK11_9AVES_55661 and tr_A0A1V4K884_A0A1V4K884_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A0V0RXK0_A0A0V0RXK0_9BILA_6336 and tr_A0A0V0VPN8_A0A0V0VPN8_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V0RXK0_A0A0V0RXK0_9BILA_6336 and tr_A0A0V1LSP2_A0A0V1LSP2_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V0RXK0_A0A0V0RXK0_9BILA_6336 and tr_A0A0V0ZPE0_A0A0V0ZPE0_9BILA_990121 are exactly identical! WARNING: Sequences tr_A0A0V0RXK0_A0A0V0RXK0_9BILA_6336 and tr_A0A0V0Y8E1_A0A0V0Y8E1_TRIPS_6337 are exactly identical! WARNING: Sequences tr_A0A0V0RXK0_A0A0V0RXK0_9BILA_6336 and tr_A0A0V1MDS0_A0A0V1MDS0_9BILA_268474 are exactly identical! WARNING: Sequences tr_A0A0V0RXK0_A0A0V0RXK0_9BILA_6336 and tr_A0A0V1PCP9_A0A0V1PCP9_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V0RXK0_A0A0V0RXK0_9BILA_6336 and tr_A0A0V0U2B6_A0A0V0U2B6_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A0V0WBD0_A0A0V0WBD0_9BILA_92179 and tr_A0A0V0UYB5_A0A0V0UYB5_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V0WBD0_A0A0V0WBD0_9BILA_92179 and tr_A0A0V1L3I5_A0A0V1L3I5_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V0WBD0_A0A0V0WBD0_9BILA_92179 and tr_A0A0V0ZMT8_A0A0V0ZMT8_9BILA_990121 are exactly identical! WARNING: Sequences tr_A0A0V0WBD0_A0A0V0WBD0_9BILA_92179 and tr_A0A0V0YAH6_A0A0V0YAH6_TRIPS_6337 are exactly identical! WARNING: Sequences tr_A0A0V0WBD0_A0A0V0WBD0_9BILA_92179 and tr_A0A0V1MCC6_A0A0V1MCC6_9BILA_268474 are exactly identical! WARNING: Sequences tr_A0A0V0WBD0_A0A0V0WBD0_9BILA_92179 and tr_A0A0V1NPM6_A0A0V1NPM6_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V0WBD0_A0A0V0WBD0_9BILA_92179 and tr_A0A0V1H0N9_A0A0V1H0N9_9BILA_268475 are exactly identical! WARNING: Sequences tr_A0A0V0WBD0_A0A0V0WBD0_9BILA_92179 and tr_A0A0V0TNR6_A0A0V0TNR6_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A1S3K373_A0A1S3K373_LINUN_7574 and tr_A0A1S3K3I2_A0A1S3K3I2_LINUN_7574 are exactly identical! WARNING: Sequences tr_A0A1S3L9M1_A0A1S3L9M1_SALSA_8030 and tr_A0A1S3P7K9_A0A1S3P7K9_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3N3T5_A0A1S3N3T5_SALSA_8030 and tr_A0A1S3S3R1_A0A1S3S3R1_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A2A2JEY5_A0A2A2JEY5_9BILA_2018661 and tr_A0A2A2KQX5_A0A2A2KQX5_9BILA_2018661 are exactly identical! WARNING: Sequences tr_A0A2D0PXA6_A0A2D0PXA6_ICTPU_7998 and tr_A0A2D0PXB4_A0A2D0PXB4_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0PXA6_A0A2D0PXA6_ICTPU_7998 and tr_A0A2D0PZ08_A0A2D0PZ08_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0PXA6_A0A2D0PXA6_ICTPU_7998 and tr_A0A2D0PZY8_A0A2D0PZY8_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0Q4A6_A0A2D0Q4A6_ICTPU_7998 and tr_A0A2D0Q5G9_A0A2D0Q5G9_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0Q4A6_A0A2D0Q4A6_ICTPU_7998 and tr_A0A2D0Q853_A0A2D0Q853_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QMW3_A0A2D0QMW3_ICTPU_7998 and tr_A0A2D0QMX3_A0A2D0QMX3_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QMW3_A0A2D0QMW3_ICTPU_7998 and tr_A0A2D0QN80_A0A2D0QN80_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QMW3_A0A2D0QMW3_ICTPU_7998 and tr_A0A2D0QNG8_A0A2D0QNG8_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QMW3_A0A2D0QMW3_ICTPU_7998 and tr_A0A2D0QNH2_A0A2D0QNH2_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QMW3_A0A2D0QMW3_ICTPU_7998 and tr_A0A2D0QQ42_A0A2D0QQ42_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QMW3_A0A2D0QMW3_ICTPU_7998 and tr_A0A2D0QQV0_A0A2D0QQV0_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0RW06_A0A2D0RW06_ICTPU_7998 and tr_A0A2D0RW07_A0A2D0RW07_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0RW06_A0A2D0RW06_ICTPU_7998 and tr_A0A2D0RWX1_A0A2D0RWX1_ICTPU_7998 are exactly identical! WARNING: Duplicate sequences found: 333 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O43525/3_mltree/O43525.raxml.reduced.phy Alignment comprises 1 partitions and 204 patterns Partition 0: noname Model: LG4X+R4 Alignment sites / patterns: 204 / 204 Gaps: 14.89 % Invariant sites: 0.00 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O43525/3_mltree/O43525.raxml.rba Parallelization scheme autoconfig: 4 worker(s) x 1 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Generating 20 random starting tree(s) with 940 taxa [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 204 / 16320 [00:00:00] Data distribution: max. searches per worker: 5 Starting ML tree search with 20 distinct starting trees [00:00:00 -191463.334691] Initial branch length optimization [00:00:05 -145394.249063] Model parameter optimization (eps = 10.000000) [00:01:21 -144938.563875] AUTODETECT spr round 1 (radius: 5) [00:03:53 -87782.601178] AUTODETECT spr round 2 (radius: 10) [00:06:32 -64759.755747] AUTODETECT spr round 3 (radius: 15) [00:09:19 -52176.696187] AUTODETECT spr round 4 (radius: 20) [00:12:41 -43630.186484] AUTODETECT spr round 5 (radius: 25) [00:16:16 -39612.857056] SPR radius for FAST iterations: 25 (autodetect) [00:16:16 -39612.857056] Model parameter optimization (eps = 3.000000) [00:17:14 -39223.292587] FAST spr round 1 (radius: 25) [00:20:29 -33034.160823] FAST spr round 2 (radius: 25) [00:23:06 -32339.122301] FAST spr round 3 (radius: 25) [00:25:22 -32289.455079] FAST spr round 4 (radius: 25) [00:27:25 -32286.401738] FAST spr round 5 (radius: 25) [00:29:25 -32286.400645] Model parameter optimization (eps = 1.000000) [00:30:04 -32269.382234] SLOW spr round 1 (radius: 5) [00:32:21 -32262.405974] SLOW spr round 2 (radius: 5) [00:34:39 -32256.847417] SLOW spr round 3 (radius: 5) [00:36:56 -32253.565031] SLOW spr round 4 (radius: 5) [00:39:14 -32253.217344] SLOW spr round 5 (radius: 5) [00:41:27 -32253.217036] SLOW spr round 6 (radius: 10) [00:43:51 -32251.636855] SLOW spr round 7 (radius: 5) [00:46:29 -32251.636633] SLOW spr round 8 (radius: 10) [00:49:07 -32248.993129] SLOW spr round 9 (radius: 5) [00:51:40 -32248.992833] SLOW spr round 10 (radius: 10) [00:54:15 -32248.400620] SLOW spr round 11 (radius: 5) [00:56:47 -32248.398641] SLOW spr round 12 (radius: 10) [00:59:21 -32248.397838] SLOW spr round 13 (radius: 15) [01:02:30 -32247.384924] SLOW spr round 14 (radius: 5) [01:05:20 -32245.829664] SLOW spr round 15 (radius: 5) [01:07:46 -32245.829453] SLOW spr round 16 (radius: 10) [01:10:16 -32244.008037] SLOW spr round 17 (radius: 5) [01:12:52 -32244.004546] SLOW spr round 18 (radius: 10) [01:15:26 -32244.004055] SLOW spr round 19 (radius: 15) [01:18:34 -32243.526966] SLOW spr round 20 (radius: 5) [01:21:20 -32243.526744] SLOW spr round 21 (radius: 10) [01:24:04 -32242.674938] SLOW spr round 22 (radius: 5) [01:26:35 -32242.674681] SLOW spr round 23 (radius: 10) [01:29:09 -32242.674634] SLOW spr round 24 (radius: 15) [01:32:13 -32242.674613] SLOW spr round 25 (radius: 20) [01:36:03 -32241.405892] SLOW spr round 26 (radius: 5) [01:38:52 -32241.405295] SLOW spr round 27 (radius: 10) [01:41:37 -32241.405239] SLOW spr round 28 (radius: 15) [01:44:43 -32241.405228] SLOW spr round 29 (radius: 20) [01:48:32 -32241.405225] SLOW spr round 30 (radius: 25) [01:53:27 -32226.749609] SLOW spr round 31 (radius: 5) [01:55:53] [worker #2] ML tree search #3, logLikelihood: -32196.828685 [01:56:20 -32222.723290] SLOW spr round 32 (radius: 5) [01:58:48 -32222.723166] SLOW spr round 33 (radius: 10) [02:01:16 -32221.127708] SLOW spr round 34 (radius: 5) [02:03:46 -32221.127499] SLOW spr round 35 (radius: 10) [02:06:16 -32221.127484] SLOW spr round 36 (radius: 15) [02:09:20 -32219.684699] SLOW spr round 37 (radius: 5) [02:11:27] [worker #1] ML tree search #2, logLikelihood: -32577.918679 [02:12:00 -32219.684698] SLOW spr round 38 (radius: 10) [02:14:39 -32219.684698] SLOW spr round 39 (radius: 15) [02:15:30] [worker #3] ML tree search #4, logLikelihood: -32237.411244 [02:17:43 -32219.684698] SLOW spr round 40 (radius: 20) [02:21:37 -32219.684698] SLOW spr round 41 (radius: 25) [02:26:42 -32208.398407] SLOW spr round 42 (radius: 5) [02:29:33 -32207.662923] SLOW spr round 43 (radius: 5) [02:32:03 -32207.145125] SLOW spr round 44 (radius: 5) [02:34:20 -32207.144463] SLOW spr round 45 (radius: 10) [02:36:38 -32207.144409] SLOW spr round 46 (radius: 15) [02:39:45 -32207.144389] SLOW spr round 47 (radius: 20) [02:43:41 -32207.144373] SLOW spr round 48 (radius: 25) [02:48:44 -32207.121190] Model parameter optimization (eps = 0.100000) [02:48:59] [worker #0] ML tree search #1, logLikelihood: -32206.685656 [02:48:59 -191325.833332] Initial branch length optimization [02:49:05 -145824.099934] Model parameter optimization (eps = 10.000000) [02:50:28 -145395.647511] AUTODETECT spr round 1 (radius: 5) [02:53:01 -87501.942217] AUTODETECT spr round 2 (radius: 10) [02:55:36 -59854.070165] AUTODETECT spr round 3 (radius: 15) [02:58:22 -48890.197546] AUTODETECT spr round 4 (radius: 20) [03:01:30 -45013.874704] AUTODETECT spr round 5 (radius: 25) [03:04:57 -39469.919433] SPR radius for FAST iterations: 25 (autodetect) [03:04:58 -39469.919433] Model parameter optimization (eps = 3.000000) [03:05:54 -39152.175307] FAST spr round 1 (radius: 25) [03:09:07 -33040.581879] FAST spr round 2 (radius: 25) [03:11:39 -32325.286047] FAST spr round 3 (radius: 25) [03:13:55 -32256.056168] FAST spr round 4 (radius: 25) [03:16:00 -32241.213694] FAST spr round 5 (radius: 25) [03:17:53 -32241.212418] Model parameter optimization (eps = 1.000000) [03:18:26 -32220.726210] SLOW spr round 1 (radius: 5) [03:20:35 -32216.144257] SLOW spr round 2 (radius: 5) [03:22:41 -32216.112649] SLOW spr round 3 (radius: 10) [03:25:03 -32213.449947] SLOW spr round 4 (radius: 5) [03:27:38 -32212.592552] SLOW spr round 5 (radius: 5) [03:29:56 -32212.590219] SLOW spr round 6 (radius: 10) [03:32:16 -32212.590208] SLOW spr round 7 (radius: 15) [03:35:36 -32211.855277] SLOW spr round 8 (radius: 5) [03:38:19 -32211.846167] SLOW spr round 9 (radius: 10) [03:41:00 -32211.227529] SLOW spr round 10 (radius: 5) [03:43:31 -32210.302548] SLOW spr round 11 (radius: 5) [03:45:45 -32210.302185] SLOW spr round 12 (radius: 10) [03:48:04 -32210.302116] SLOW spr round 13 (radius: 15) [03:51:23 -32210.302090] SLOW spr round 14 (radius: 20) [03:55:39 -32205.863793] SLOW spr round 15 (radius: 5) [03:58:28 -32205.673222] SLOW spr round 16 (radius: 5) [04:00:50] [worker #1] ML tree search #6, logLikelihood: -32248.649156 [04:00:54 -32205.670248] SLOW spr round 17 (radius: 10) [04:03:23 -32205.669322] SLOW spr round 18 (radius: 15) [04:06:42 -32205.443618] SLOW spr round 19 (radius: 5) [04:09:23 -32205.443584] SLOW spr round 20 (radius: 10) [04:12:04 -32205.443581] SLOW spr round 21 (radius: 15) [04:15:19 -32205.443578] SLOW spr round 22 (radius: 20) [04:19:37 -32202.782935] SLOW spr round 23 (radius: 5) [04:22:23 -32202.782435] SLOW spr round 24 (radius: 10) [04:25:13 -32201.802212] SLOW spr round 25 (radius: 5) [04:27:44 -32201.709511] SLOW spr round 26 (radius: 10) [04:30:15 -32201.706322] SLOW spr round 27 (radius: 15) [04:33:30 -32201.705882] SLOW spr round 28 (radius: 20) [04:37:47 -32201.705820] SLOW spr round 29 (radius: 25) [04:40:53] [worker #2] ML tree search #7, logLikelihood: -32191.101092 [04:43:29 -32200.226522] SLOW spr round 30 (radius: 5) [04:46:17 -32199.883381] SLOW spr round 31 (radius: 5) [04:48:45 -32199.882864] SLOW spr round 32 (radius: 10) [04:49:10] [worker #3] ML tree search #8, logLikelihood: -32173.338290 [04:51:14 -32199.882383] SLOW spr round 33 (radius: 15) [04:54:29 -32199.882017] SLOW spr round 34 (radius: 20) [04:58:46 -32199.881765] SLOW spr round 35 (radius: 25) [05:04:28 -32199.881595] Model parameter optimization (eps = 0.100000) [05:04:39] [worker #0] ML tree search #5, logLikelihood: -32199.839457 [05:04:39 -192178.514969] Initial branch length optimization [05:04:45 -146716.670298] Model parameter optimization (eps = 10.000000) [05:06:03 -146332.214884] AUTODETECT spr round 1 (radius: 5) [05:08:33 -89221.395040] AUTODETECT spr round 2 (radius: 10) [05:11:16 -64920.928309] AUTODETECT spr round 3 (radius: 15) [05:14:08 -49643.930933] AUTODETECT spr round 4 (radius: 20) [05:17:14 -43565.014878] AUTODETECT spr round 5 (radius: 25) [05:20:30 -40935.759363] SPR radius for FAST iterations: 25 (autodetect) [05:20:30 -40935.759363] Model parameter optimization (eps = 3.000000) [05:21:32 -40585.507212] FAST spr round 1 (radius: 25) [05:24:51 -36508.045138] FAST spr round 2 (radius: 25) [05:27:23 -36026.260158] FAST spr round 3 (radius: 25) [05:29:47 -34169.474703] FAST spr round 4 (radius: 25) [05:32:04 -32930.561261] FAST spr round 5 (radius: 25) [05:34:14 -32672.961244] FAST spr round 6 (radius: 25) [05:36:18 -32648.947790] FAST spr round 7 (radius: 25) [05:38:13 -32639.008973] FAST spr round 8 (radius: 25) [05:40:08 -32634.975884] FAST spr round 9 (radius: 25) [05:42:01 -32633.959073] FAST spr round 10 (radius: 25) [05:43:53 -32633.957530] Model parameter optimization (eps = 1.000000) [05:44:23 -32624.534098] SLOW spr round 1 (radius: 5) [05:46:32 -32620.478863] SLOW spr round 2 (radius: 5) [05:48:39 -32619.962724] SLOW spr round 3 (radius: 5) [05:50:44 -32619.961805] SLOW spr round 4 (radius: 10) [05:53:06 -32609.180385] SLOW spr round 5 (radius: 5) [05:55:45 -32608.864658] SLOW spr round 6 (radius: 5) [05:58:05 -32608.864454] SLOW spr round 7 (radius: 10) [06:00:36 -32289.626595] SLOW spr round 8 (radius: 5) [06:03:18 -32275.121581] SLOW spr round 9 (radius: 5) [06:05:46 -32273.147532] SLOW spr round 10 (radius: 5) [06:08:03 -32270.262832] SLOW spr round 11 (radius: 5) [06:10:17 -32266.359721] SLOW spr round 12 (radius: 5) [06:12:25 -32266.356994] SLOW spr round 13 (radius: 10) [06:14:46 -32265.240502] SLOW spr round 14 (radius: 5) [06:17:23 -32265.228727] SLOW spr round 15 (radius: 10) [06:20:02 -32261.880762] SLOW spr round 16 (radius: 5) [06:22:34 -32261.879969] SLOW spr round 17 (radius: 10) [06:25:07 -32261.879895] SLOW spr round 18 (radius: 15) [06:28:27 -32246.747010] SLOW spr round 19 (radius: 5) [06:31:16 -32242.075058] SLOW spr round 20 (radius: 5) [06:33:46 -32241.657802] SLOW spr round 21 (radius: 5) [06:36:00 -32241.657201] SLOW spr round 22 (radius: 10) [06:38:18 -32241.389794] SLOW spr round 23 (radius: 5) [06:40:56 -32241.369010] SLOW spr round 24 (radius: 10) [06:43:35 -32241.367184] SLOW spr round 25 (radius: 15) [06:46:49 -32239.240907] SLOW spr round 26 (radius: 5) [06:49:33 -32239.219318] SLOW spr round 27 (radius: 10) [06:52:15 -32239.218654] SLOW spr round 28 (radius: 15) [06:55:28 -32239.218608] SLOW spr round 29 (radius: 20) [06:59:43 -32228.051044] SLOW spr round 30 (radius: 5) [07:02:36 -32224.818672] SLOW spr round 31 (radius: 5) [07:05:05 -32219.941132] SLOW spr round 32 (radius: 5) [07:06:01] [worker #1] ML tree search #10, logLikelihood: -32194.796275 [07:07:21 -32219.889191] SLOW spr round 33 (radius: 10) [07:09:38 -32219.889041] SLOW spr round 34 (radius: 15) [07:12:58 -32217.072482] SLOW spr round 35 (radius: 5) [07:15:42 -32217.067625] SLOW spr round 36 (radius: 10) [07:18:23 -32217.010514] SLOW spr round 37 (radius: 15) [07:21:39 -32217.010473] SLOW spr round 38 (radius: 20) [07:26:11 -32212.357724] SLOW spr round 39 (radius: 5) [07:29:04 -32208.375961] SLOW spr round 40 (radius: 5) [07:31:32 -32208.374611] SLOW spr round 41 (radius: 10) [07:34:00 -32208.089465] SLOW spr round 42 (radius: 5) [07:36:33 -32208.087782] SLOW spr round 43 (radius: 10) [07:39:06 -32208.087745] SLOW spr round 44 (radius: 15) [07:42:17 -32208.086363] SLOW spr round 45 (radius: 20) [07:46:27 -32206.868572] SLOW spr round 46 (radius: 5) [07:49:16 -32206.565256] SLOW spr round 47 (radius: 5) [07:50:33] [worker #2] ML tree search #11, logLikelihood: -32228.476822 [07:51:43 -32206.562305] SLOW spr round 48 (radius: 10) [07:54:11 -32206.056366] SLOW spr round 49 (radius: 5) [07:56:43 -32206.009226] SLOW spr round 50 (radius: 10) [07:59:17 -32206.007649] SLOW spr round 51 (radius: 15) [08:02:28 -32206.007484] SLOW spr round 52 (radius: 20) [08:04:46] [worker #3] ML tree search #12, logLikelihood: -32563.113553 [08:06:37 -32205.688828] SLOW spr round 53 (radius: 5) [08:09:27 -32205.633438] SLOW spr round 54 (radius: 10) [08:12:11 -32205.631260] SLOW spr round 55 (radius: 15) [08:15:22 -32205.630459] SLOW spr round 56 (radius: 20) [08:19:27 -32205.630150] SLOW spr round 57 (radius: 25) [08:24:33 -32200.659977] SLOW spr round 58 (radius: 5) [08:27:26 -32199.016592] SLOW spr round 59 (radius: 5) [08:29:55 -32199.015899] SLOW spr round 60 (radius: 10) [08:32:23 -32199.015772] SLOW spr round 61 (radius: 15) [08:35:35 -32199.015742] SLOW spr round 62 (radius: 20) [08:39:41 -32199.015732] SLOW spr round 63 (radius: 25) [08:44:42 -32199.015728] Model parameter optimization (eps = 0.100000) [08:45:14] [worker #0] ML tree search #9, logLikelihood: -32193.285865 [08:45:14 -195135.512707] Initial branch length optimization [08:45:19 -149353.000715] Model parameter optimization (eps = 10.000000) [08:47:08 -148914.926410] AUTODETECT spr round 1 (radius: 5) [08:49:39 -91000.025570] AUTODETECT spr round 2 (radius: 10) [08:52:16 -66097.514425] AUTODETECT spr round 3 (radius: 15) [08:55:10 -52322.801164] AUTODETECT spr round 4 (radius: 20) [08:58:37 -43322.580869] AUTODETECT spr round 5 (radius: 25) [09:02:27 -38815.046058] SPR radius for FAST iterations: 25 (autodetect) [09:02:27 -38815.046058] Model parameter optimization (eps = 3.000000) [09:03:11 -38464.531201] FAST spr round 1 (radius: 25) [09:06:32 -32910.873365] FAST spr round 2 (radius: 25) [09:08:59 -32296.076919] FAST spr round 3 (radius: 25) [09:11:08 -32250.629619] FAST spr round 4 (radius: 25) [09:13:10 -32244.752212] FAST spr round 5 (radius: 25) [09:15:06 -32241.243112] FAST spr round 6 (radius: 25) [09:15:23] [worker #1] ML tree search #14, logLikelihood: -32234.124860 [09:17:00 -32240.429223] FAST spr round 7 (radius: 25) [09:18:52 -32240.429107] Model parameter optimization (eps = 1.000000) [09:19:25 -32218.993080] SLOW spr round 1 (radius: 5) [09:21:35 -32216.382941] SLOW spr round 2 (radius: 5) [09:23:42 -32216.381375] SLOW spr round 3 (radius: 10) [09:26:04 -32212.592935] SLOW spr round 4 (radius: 5) [09:28:45 -32207.737396] SLOW spr round 5 (radius: 5) [09:31:11 -32206.266041] SLOW spr round 6 (radius: 5) [09:33:21 -32206.265936] SLOW spr round 7 (radius: 10) [09:35:36 -32205.870174] SLOW spr round 8 (radius: 5) [09:38:11 -32205.275383] SLOW spr round 9 (radius: 5) [09:40:30 -32205.273203] SLOW spr round 10 (radius: 10) [09:42:50 -32203.119426] SLOW spr round 11 (radius: 5) [09:45:23 -32203.119365] SLOW spr round 12 (radius: 10) [09:47:55 -32203.119362] SLOW spr round 13 (radius: 15) [09:51:08 -32197.289878] SLOW spr round 14 (radius: 5) [09:53:51 -32197.285741] SLOW spr round 15 (radius: 10) [09:56:30 -32197.285470] SLOW spr round 16 (radius: 15) [09:59:38 -32197.285437] SLOW spr round 17 (radius: 20) [10:03:55 -32196.831018] SLOW spr round 18 (radius: 5) [10:06:41 -32196.830747] SLOW spr round 19 (radius: 10) [10:09:22 -32196.830738] SLOW spr round 20 (radius: 15) [10:12:28 -32195.832828] SLOW spr round 21 (radius: 5) [10:15:10 -32195.831600] SLOW spr round 22 (radius: 10) [10:17:48 -32195.830755] SLOW spr round 23 (radius: 15) [10:20:55 -32195.830171] SLOW spr round 24 (radius: 20) [10:25:05 -32195.829767] SLOW spr round 25 (radius: 25) [10:30:28 -32180.248791] SLOW spr round 26 (radius: 5) [10:33:22 -32179.178806] SLOW spr round 27 (radius: 5) [10:35:55 -32178.509713] SLOW spr round 28 (radius: 5) [10:38:12 -32178.507911] SLOW spr round 29 (radius: 10) [10:40:29 -32178.507655] SLOW spr round 30 (radius: 15) [10:43:43 -32178.507603] SLOW spr round 31 (radius: 20) [10:48:00 -32177.531398] SLOW spr round 32 (radius: 5) [10:50:47 -32177.530284] SLOW spr round 33 (radius: 10) [10:53:28 -32177.530266] SLOW spr round 34 (radius: 15) [10:56:36 -32177.530264] SLOW spr round 35 (radius: 20) [11:00:54 -32177.530263] SLOW spr round 36 (radius: 25) [11:06:20 -32177.530263] Model parameter optimization (eps = 0.100000) [11:06:34] [worker #0] ML tree search #13, logLikelihood: -32177.213466 [11:06:34 -191687.638740] Initial branch length optimization [11:06:40 -145845.283824] Model parameter optimization (eps = 10.000000) [11:08:06 -145415.242173] AUTODETECT spr round 1 (radius: 5) [11:10:35 -84664.162411] AUTODETECT spr round 2 (radius: 10) [11:13:13 -61339.548690] AUTODETECT spr round 3 (radius: 15) [11:15:58 -50736.800912] AUTODETECT spr round 4 (radius: 20) [11:19:01 -43430.317925] AUTODETECT spr round 5 (radius: 25) [11:22:25 -38970.319845] SPR radius for FAST iterations: 25 (autodetect) [11:22:25 -38970.319845] Model parameter optimization (eps = 3.000000) [11:23:24 -38604.623907] FAST spr round 1 (radius: 25) [11:26:41 -32701.595518] FAST spr round 2 (radius: 25) [11:29:13 -32288.314506] FAST spr round 3 (radius: 25) [11:31:26 -32257.321713] FAST spr round 4 (radius: 25) [11:33:12] [worker #3] ML tree search #16, logLikelihood: -32212.515686 [11:33:25 -32256.059372] FAST spr round 5 (radius: 25) [11:35:16 -32256.053177] Model parameter optimization (eps = 1.000000) [11:35:52 -32238.613937] SLOW spr round 1 (radius: 5) [11:38:01 -32230.100816] SLOW spr round 2 (radius: 5) [11:40:12 -32228.105198] SLOW spr round 3 (radius: 5) [11:41:04] [worker #2] ML tree search #15, logLikelihood: -32175.541698 [11:42:19 -32227.803504] SLOW spr round 4 (radius: 5) [11:44:22 -32227.803120] SLOW spr round 5 (radius: 10) [11:46:42 -32224.255609] SLOW spr round 6 (radius: 5) [11:49:19 -32224.053108] SLOW spr round 7 (radius: 5) [11:51:38 -32223.431104] SLOW spr round 8 (radius: 5) [11:53:46 -32223.431092] SLOW spr round 9 (radius: 10) [11:56:04 -32219.596088] SLOW spr round 10 (radius: 5) [11:57:11] [worker #1] ML tree search #18, logLikelihood: -32192.762375 [11:58:40 -32216.814918] SLOW spr round 11 (radius: 5) [12:00:57 -32216.814650] SLOW spr round 12 (radius: 10) [12:03:14 -32215.519312] SLOW spr round 13 (radius: 5) [12:05:45 -32215.519289] SLOW spr round 14 (radius: 10) [12:08:17 -32213.409986] SLOW spr round 15 (radius: 5) [12:10:48 -32213.388505] SLOW spr round 16 (radius: 10) [12:13:17 -32213.388150] SLOW spr round 17 (radius: 15) [12:16:23 -32212.156605] SLOW spr round 18 (radius: 5) [12:19:03 -32212.075491] SLOW spr round 19 (radius: 10) [12:21:41 -32211.755113] SLOW spr round 20 (radius: 5) [12:24:09 -32211.754699] SLOW spr round 21 (radius: 10) [12:26:37 -32211.754552] SLOW spr round 22 (radius: 15) [12:29:42 -32211.754460] SLOW spr round 23 (radius: 20) [12:33:35 -32209.363799] SLOW spr round 24 (radius: 5) [12:36:20 -32207.433613] SLOW spr round 25 (radius: 5) [12:38:43 -32207.433234] SLOW spr round 26 (radius: 10) [12:41:06 -32207.433204] SLOW spr round 27 (radius: 15) [12:44:14 -32207.433188] SLOW spr round 28 (radius: 20) [12:48:14 -32206.142797] SLOW spr round 29 (radius: 5) [12:50:59 -32206.080700] SLOW spr round 30 (radius: 10) [12:53:42 -32206.080448] SLOW spr round 31 (radius: 15) [12:56:48 -32206.080437] SLOW spr round 32 (radius: 20) [13:00:47 -32206.080433] SLOW spr round 33 (radius: 25) [13:05:25] [worker #3] ML tree search #20, logLikelihood: -32265.428514 [13:06:10 -32200.906303] SLOW spr round 34 (radius: 5) [13:09:01 -32197.635728] SLOW spr round 35 (radius: 5) [13:11:34 -32195.570095] SLOW spr round 36 (radius: 5) [13:13:48 -32195.114710] SLOW spr round 37 (radius: 5) [13:15:54 -32195.112298] SLOW spr round 38 (radius: 10) [13:18:06 -32195.112033] SLOW spr round 39 (radius: 15) [13:21:21 -32195.112007] SLOW spr round 40 (radius: 20) [13:25:32 -32195.112004] SLOW spr round 41 (radius: 25) [13:31:05 -32195.112004] Model parameter optimization (eps = 0.100000) [13:31:14] [worker #0] ML tree search #17, logLikelihood: -32195.058296 [13:41:52] [worker #2] ML tree search #19, logLikelihood: -32953.392332 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.212174,0.756447) (0.171122,1.841229) (0.568502,0.675628) (0.048202,2.911305) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Final LogLikelihood: -32173.338290 AIC score: 68112.676581 / AICc score: 7163256.676581 / BIC score: 74360.696529 Free parameters (model + branch lengths): 1883 WARNING: Number of free parameters (K=1883) is larger than alignment size (n=204). This might lead to overfitting and compromise tree inference results! WARNING: Best ML tree contains 491 near-zero branches! Best ML tree with collapsed near-zero branches saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O43525/3_mltree/O43525.raxml.bestTreeCollapsed Best ML tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O43525/3_mltree/O43525.raxml.bestTree All ML trees saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O43525/3_mltree/O43525.raxml.mlTrees Optimized model saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O43525/3_mltree/O43525.raxml.bestModel Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O43525/3_mltree/O43525.raxml.log Analysis started: 06-Jul-2021 01:09:30 / finished: 06-Jul-2021 14:51:23 Elapsed time: 49312.344 seconds Consumed energy: 4741.125 Wh (= 24 km in an electric car, or 119 km with an e-scooter!)