RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 03-Jun-2021 04:02:50 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O15537/2_msa/O15537_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O15537/3_mltree/O15537.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O15537/4_raxmlng_ancestral/O15537 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622682170 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O15537/2_msa/O15537_nogap_msa.fasta [00:00:00] Loaded alignment with 1000 taxa and 224 sites WARNING: Sequences tr_M3Y9I9_M3Y9I9_MUSPF_9669 and tr_A0A2U3XS10_A0A2U3XS10_LEPWE_9713 are exactly identical! WARNING: Sequences tr_M3Y9I9_M3Y9I9_MUSPF_9669 and tr_A0A2Y9JHM6_A0A2Y9JHM6_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3Y9I9_M3Y9I9_MUSPF_9669 and tr_A0A384DCU5_A0A384DCU5_URSMA_29073 are exactly identical! WARNING: Sequences tr_G1REZ1_G1REZ1_NOMLE_61853 and tr_H2QYD2_H2QYD2_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1REZ1_G1REZ1_NOMLE_61853 and sp_O15537_XLRS1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1REZ1_G1REZ1_NOMLE_61853 and tr_A0A0D9RQE1_A0A0D9RQE1_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G1REZ1_G1REZ1_NOMLE_61853 and tr_A0A2K6DXK6_A0A2K6DXK6_MACNE_9545 are exactly identical! WARNING: Sequences tr_G1REZ1_G1REZ1_NOMLE_61853 and tr_A0A2R9CDT4_A0A2R9CDT4_PANPA_9597 are exactly identical! WARNING: Sequences tr_G1RSR1_G1RSR1_NOMLE_61853 and tr_A0A2I2Y2T5_A0A2I2Y2T5_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1RSR1_G1RSR1_NOMLE_61853 and tr_H2PG16_H2PG16_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1RSR1_G1RSR1_NOMLE_61853 and tr_A0A2I3T8Y9_A0A2I3T8Y9_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3R279_G3R279_GORGO_9595 and tr_H2P8D7_H2P8D7_PONAB_9601 are exactly identical! WARNING: Sequences tr_G3R279_G3R279_GORGO_9595 and tr_H2QJA3_H2QJA3_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3R279_G3R279_GORGO_9595 and sp_O60462_NRP2_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3R279_G3R279_GORGO_9595 and tr_A0A2R9C6T9_A0A2R9C6T9_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3RF38_G3RF38_GORGO_9595 and tr_A0A2J8L658_A0A2J8L658_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3RF38_G3RF38_GORGO_9595 and tr_A0A2R8ZY45_A0A2R8ZY45_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2P9X5_H2P9X5_PONAB_9601 and tr_F7HMP8_F7HMP8_MACMU_9544 are exactly identical! WARNING: Sequences tr_H2P9X5_H2P9X5_PONAB_9601 and tr_G7NZ82_G7NZ82_MACFA_9541 are exactly identical! WARNING: Sequences tr_H2P9X5_H2P9X5_PONAB_9601 and tr_A0A0D9R123_A0A0D9R123_CHLSB_60711 are exactly identical! WARNING: Sequences tr_H2P9X5_H2P9X5_PONAB_9601 and tr_A0A2K6CHI1_A0A2K6CHI1_MACNE_9545 are exactly identical! WARNING: Sequences tr_E2RJ14_E2RJ14_CANLF_9615 and tr_A0A2U3WFT7_A0A2U3WFT7_ODORO_9708 are exactly identical! WARNING: Sequences tr_E2RJ14_E2RJ14_CANLF_9615 and tr_A0A2Y9KSS5_A0A2Y9KSS5_ENHLU_391180 are exactly identical! WARNING: Sequences tr_H2QN01_H2QN01_PANTR_9598 and tr_A0A2R9ABR2_A0A2R9ABR2_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2QZV8_H2QZV8_PANTR_9598 and sp_P12259_FA5_HUMAN_9606 are exactly identical! WARNING: Sequences tr_H2QZV8_H2QZV8_PANTR_9598 and tr_A0A2R9BMQ2_A0A2R9BMQ2_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2R1R6_H2R1R6_PANTR_9598 and sp_P00451_FA8_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A3B5R8B3_A0A3B5R8B3_XIPMA_8083 and tr_A0A087X8N9_A0A087X8N9_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A1D5QJP4_A0A1D5QJP4_MACMU_9544 and tr_A0A096NPX1_A0A096NPX1_PAPAN_9555 are exactly identical! WARNING: Sequences tr_A0A1D5QJP4_A0A1D5QJP4_MACMU_9544 and tr_A0A2K5M1S0_A0A2K5M1S0_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A1D5QJP4_A0A1D5QJP4_MACMU_9544 and tr_A0A2K6C912_A0A2K6C912_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A1D5QJP4_A0A1D5QJP4_MACMU_9544 and tr_A0A2K5YD51_A0A2K5YD51_MANLE_9568 are exactly identical! WARNING: Sequences tr_F6QMC6_F6QMC6_MACMU_9544 and tr_G7Q233_G7Q233_MACFA_9541 are exactly identical! WARNING: Sequences tr_F6QMC6_F6QMC6_MACMU_9544 and tr_A0A096NYD7_A0A096NYD7_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F6QMC6_F6QMC6_MACMU_9544 and tr_A0A2K5LQN9_A0A2K5LQN9_CERAT_9531 are exactly identical! WARNING: Sequences tr_F6QMC6_F6QMC6_MACMU_9544 and tr_A0A2K6C5G2_A0A2K6C5G2_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7G9W1_F7G9W1_MACMU_9544 and tr_G7PL91_G7PL91_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7G9W1_F7G9W1_MACMU_9544 and tr_A0A096N6G9_A0A096N6G9_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F7G9W1_F7G9W1_MACMU_9544 and tr_A0A0D9RD02_A0A0D9RD02_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F7G9W1_F7G9W1_MACMU_9544 and tr_A0A2K6D5X4_A0A2K6D5X4_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7G9W1_F7G9W1_MACMU_9544 and tr_A0A2K5Z5G7_A0A2K5Z5G7_MANLE_9568 are exactly identical! WARNING: Sequences tr_G7MYS0_G7MYS0_MACMU_9544 and tr_G7P9E2_G7P9E2_MACFA_9541 are exactly identical! WARNING: Sequences tr_G7MYS0_G7MYS0_MACMU_9544 and tr_A0A2K6BFI1_A0A2K6BFI1_MACNE_9545 are exactly identical! WARNING: Sequences tr_G7MYS0_G7MYS0_MACMU_9544 and tr_A0A2K5ZZ45_A0A2K5ZZ45_MANLE_9568 are exactly identical! WARNING: Sequences tr_W4XE26_W4XE26_STRPU_7668 and tr_W4XUJ6_W4XUJ6_STRPU_7668 are exactly identical! WARNING: Sequences tr_W4XE26_W4XE26_STRPU_7668 and tr_W4XUJ7_W4XUJ7_STRPU_7668 are exactly identical! WARNING: Sequences tr_G1L8W8_G1L8W8_AILME_9646 and tr_A0A384BSR5_A0A384BSR5_URSMA_29073 are exactly identical! WARNING: Sequences tr_G7P7W7_G7P7W7_MACFA_9541 and tr_A0A096MMM3_A0A096MMM3_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G7P7W7_G7P7W7_MACFA_9541 and tr_A0A0D9RQQ2_A0A0D9RQQ2_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G7P7W7_G7P7W7_MACFA_9541 and tr_A0A2K6DVL4_A0A2K6DVL4_MACNE_9545 are exactly identical! WARNING: Sequences tr_G7P7W7_G7P7W7_MACFA_9541 and tr_A0A2K5YLW5_A0A2K5YLW5_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A096NN57_A0A096NN57_PAPAN_9555 and tr_A0A2K5KIE1_A0A2K5KIE1_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A151N9C1_A0A151N9C1_ALLMI_8496 and tr_A0A1U7RUT4_A0A1U7RUT4_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A091EV66_A0A091EV66_CORBR_85066 and tr_A0A091UPC1_A0A091UPC1_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091EV66_A0A091EV66_CORBR_85066 and tr_A0A087R6G9_A0A087R6G9_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A091IUJ8_A0A091IUJ8_EGRGA_188379 and tr_A0A091UN93_A0A091UN93_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091FZE9_A0A091FZE9_9AVES_55661 and tr_A0A0A0AMM9_A0A0A0AMM9_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A091FZE9_A0A091FZE9_9AVES_55661 and tr_A0A093G253_A0A093G253_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A226N7L8_A0A226N7L8_CALSU_9009 and tr_A0A226PLN3_A0A226PLN3_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A226N9Z2_A0A226N9Z2_CALSU_9009 and tr_A0A226PBT8_A0A226PBT8_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2D0PSJ7_A0A2D0PSJ7_ICTPU_7998 and tr_W5UIZ7_W5UIZ7_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0R7E0_A0A2D0R7E0_ICTPU_7998 and tr_A0A2D0R812_A0A2D0R812_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2K5LDR7_A0A2K5LDR7_CERAT_9531 and tr_A0A2K5XQB0_A0A2K5XQB0_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A2U4ABA3_A0A2U4ABA3_TURTR_9739 and tr_A0A2Y9SAT4_A0A2Y9SAT4_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2U4AWH0_A0A2U4AWH0_TURTR_9739 and tr_A0A2Y9FUA6_A0A2Y9FUA6_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2U4BN37_A0A2U4BN37_TURTR_9739 and tr_A0A2U4BN42_A0A2U4BN42_TURTR_9739 are exactly identical! WARNING: Sequences tr_A0A2U4BN37_A0A2U4BN37_TURTR_9739 and tr_A0A2U4BN43_A0A2U4BN43_TURTR_9739 are exactly identical! WARNING: Sequences tr_A0A2U4BN37_A0A2U4BN37_TURTR_9739 and tr_A0A2U4BN98_A0A2U4BN98_TURTR_9739 are exactly identical! WARNING: Sequences tr_A0A2U4BN37_A0A2U4BN37_TURTR_9739 and tr_A0A2U4BNF8_A0A2U4BNF8_TURTR_9739 are exactly identical! WARNING: Sequences tr_A0A2U4BN37_A0A2U4BN37_TURTR_9739 and tr_A0A2Y9MQJ7_A0A2Y9MQJ7_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U4BN37_A0A2U4BN37_TURTR_9739 and tr_A0A384ATM3_A0A384ATM3_BALAS_310752 are exactly identical! WARNING: Sequences tr_A0A2Y9FEB6_A0A2Y9FEB6_PHYCD_9755 and tr_A0A383ZEX1_A0A383ZEX1_BALAS_310752 are exactly identical! WARNING: Duplicate sequences found: 72 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O15537/4_raxmlng_ancestral/O15537.raxml.reduced.phy Alignment comprises 1 partitions and 224 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 224 Gaps: 27.31 % Invariant sites: 0.00 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O15537/4_raxmlng_ancestral/O15537.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O15537/3_mltree/O15537.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 56 / 4480 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -91238.696847 [00:00:00 -91238.696847] Initial branch length optimization [00:00:00 -87603.775218] Model parameter optimization (eps = 0.100000) [00:00:33] Tree #1, final logLikelihood: -87198.240448 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.172670,0.428553) (0.155270,0.544235) (0.396736,0.943376) (0.275324,1.697007) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O15537/4_raxmlng_ancestral/O15537.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O15537/4_raxmlng_ancestral/O15537.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O15537/4_raxmlng_ancestral/O15537.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O15537/4_raxmlng_ancestral/O15537.raxml.log Analysis started: 03-Jun-2021 04:02:50 / finished: 03-Jun-2021 04:03:26 Elapsed time: 36.450 seconds Consumed energy: 3.225 Wh