RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 05-Jul-2021 18:58:09 as follows: raxml-ng --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O14649/2_msa/O14649_trimmed_msa.fasta --data-type AA --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O14649/3_mltree/O14649 --seed 2 --threads 2 --tree rand{20} pars{20} Analysis options: run mode: ML tree search start tree(s): random (20) random seed: 2 tip-inner: OFF pattern compression: ON per-rate scalers: OFF site repeats: ON fast spr radius: AUTO spr subtree cutoff: 1.000000 branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (2 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O14649/2_msa/O14649_trimmed_msa.fasta [00:00:00] Loaded alignment with 993 taxa and 119 sites WARNING: Sequences tr_B4QWM6_B4QWM6_DROSI_7240 and tr_Q9VHE0_Q9VHE0_DROME_7227 are exactly identical! WARNING: Sequences tr_B4QWM6_B4QWM6_DROSI_7240 and tr_B4HKD9_B4HKD9_DROSE_7238 are exactly identical! WARNING: Sequences tr_B4QWM6_B4QWM6_DROSI_7240 and tr_B4N8V9_B4N8V9_DROWI_7260 are exactly identical! WARNING: Sequences tr_B4QWM6_B4QWM6_DROSI_7240 and tr_B3M058_B3M058_DROAN_7217 are exactly identical! WARNING: Sequences tr_B4QWM6_B4QWM6_DROSI_7240 and tr_A0A1W4VPF3_A0A1W4VPF3_DROFC_30025 are exactly identical! WARNING: Sequences tr_B4R168_B4R168_DROSI_7240 and tr_Q9VFS9_Q9VFS9_DROME_7227 are exactly identical! WARNING: Sequences tr_B4R168_B4R168_DROSI_7240 and tr_B4HFQ2_B4HFQ2_DROSE_7238 are exactly identical! WARNING: Sequences tr_B4R168_B4R168_DROSI_7240 and tr_A0A1W4VTW9_A0A1W4VTW9_DROFC_30025 are exactly identical! WARNING: Sequences tr_E9G6Z1_E9G6Z1_DAPPU_6669 and tr_A0A0P6H5I6_A0A0P6H5I6_9CRUS_35525 are exactly identical! WARNING: Sequences tr_E9GAM9_E9GAM9_DAPPU_6669 and tr_A0A164Z6P4_A0A164Z6P4_9CRUS_35525 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_G1NJT3_G1NJT3_MELGA_9103 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_F6SSW2_F6SSW2_MONDO_13616 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_G3VRP9_G3VRP9_SARHA_9305 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_H0ZQW5_H0ZQW5_TAEGU_59729 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_U3JJG3_U3JJG3_FICAL_59894 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_R0LKN0_R0LKN0_ANAPL_8839 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_A0A151P878_A0A151P878_ALLMI_8496 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_A0A0Q3PEW4_A0A0Q3PEW4_AMAAE_12930 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_A0A091J464_A0A091J464_EGRGA_188379 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_A0A093PH57_A0A093PH57_9PASS_328815 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_A0A091VYI2_A0A091VYI2_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_A0A087RDB3_A0A087RDB3_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_A0A093GXV9_A0A093GXV9_STRCA_441894 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_A0A099YWN8_A0A099YWN8_TINGU_94827 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_A0A091GDM8_A0A091GDM8_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_A0A0A0APN6_A0A0A0APN6_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_A0A2I0MW60_A0A2I0MW60_COLLI_8932 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_A0A093GCL2_A0A093GCL2_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_A0A091HPS5_A0A091HPS5_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_A0A1U7R336_A0A1U7R336_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_A0A1V4JTS6_A0A1V4JTS6_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_A0A226N7J1_A0A226N7J1_CALSU_9009 are exactly identical! WARNING: Sequences tr_A0A1D5PDB8_A0A1D5PDB8_CHICK_9031 and tr_A0A226NSE2_A0A226NSE2_COLVI_9014 are exactly identical! WARNING: Sequences tr_F1NP03_F1NP03_CHICK_9031 and tr_U3IKI6_U3IKI6_ANAPL_8839 are exactly identical! WARNING: Sequences tr_F1NP03_F1NP03_CHICK_9031 and tr_A0A226MMU6_A0A226MMU6_CALSU_9009 are exactly identical! WARNING: Sequences tr_F1NP03_F1NP03_CHICK_9031 and tr_A0A226P5J0_A0A226P5J0_COLVI_9014 are exactly identical! WARNING: Sequences tr_F1NUZ5_F1NUZ5_CHICK_9031 and tr_U3IPJ7_U3IPJ7_ANAPL_8839 are exactly identical! WARNING: Sequences tr_F1NZ45_F1NZ45_CHICK_9031 and tr_G1NB67_G1NB67_MELGA_9103 are exactly identical! WARNING: Sequences tr_F1NZ45_F1NZ45_CHICK_9031 and tr_F6VTM6_F6VTM6_ORNAN_9258 are exactly identical! WARNING: Sequences tr_F1NZ45_F1NZ45_CHICK_9031 and tr_R0LH38_R0LH38_ANAPL_8839 are exactly identical! WARNING: Sequences tr_F1NZ45_F1NZ45_CHICK_9031 and tr_A0A091JN39_A0A091JN39_EGRGA_188379 are exactly identical! WARNING: Sequences tr_F1NZ45_F1NZ45_CHICK_9031 and tr_A0A091VTS5_A0A091VTS5_NIPNI_128390 are exactly identical! WARNING: Sequences tr_F1NZ45_F1NZ45_CHICK_9031 and tr_A0A087R2P7_A0A087R2P7_APTFO_9233 are exactly identical! WARNING: Sequences tr_F1NZ45_F1NZ45_CHICK_9031 and tr_A0A093HFT3_A0A093HFT3_STRCA_441894 are exactly identical! WARNING: Sequences tr_F1NZ45_F1NZ45_CHICK_9031 and tr_A0A091W2S2_A0A091W2S2_OPIHO_30419 are exactly identical! WARNING: Sequences tr_F1NZ45_F1NZ45_CHICK_9031 and tr_A0A091FZK1_A0A091FZK1_9AVES_55661 are exactly identical! WARNING: Sequences tr_F1NZ45_F1NZ45_CHICK_9031 and tr_A0A0A0A346_A0A0A0A346_CHAVO_50402 are exactly identical! WARNING: Sequences tr_F1NZ45_F1NZ45_CHICK_9031 and tr_A0A2I0M527_A0A2I0M527_COLLI_8932 are exactly identical! WARNING: Sequences tr_F1NZ45_F1NZ45_CHICK_9031 and tr_A0A093GCZ2_A0A093GCZ2_DRYPU_118200 are exactly identical! WARNING: Sequences tr_F1NZ45_F1NZ45_CHICK_9031 and tr_A0A091I6I5_A0A091I6I5_CALAN_9244 are exactly identical! WARNING: Sequences tr_F1NZ45_F1NZ45_CHICK_9031 and tr_A0A1V4JJB8_A0A1V4JJB8_PATFA_372326 are exactly identical! WARNING: Sequences tr_G5E845_G5E845_MOUSE_10090 and tr_D3ZLR9_D3ZLR9_RAT_10116 are exactly identical! WARNING: Sequences sp_O35111_KCNK3_MOUSE_10090 and tr_G3GXR2_G3GXR2_CRIGR_10029 are exactly identical! WARNING: Sequences sp_O35111_KCNK3_MOUSE_10090 and sp_O54912_KCNK3_RAT_10116 are exactly identical! WARNING: Sequences sp_O35111_KCNK3_MOUSE_10090 and tr_A0A1U7QJH3_A0A1U7QJH3_MESAU_10036 are exactly identical! WARNING: Sequences sp_P97438_KCNK2_MOUSE_10090 and tr_F7DDK0_F7DDK0_MONDO_13616 are exactly identical! WARNING: Sequences sp_P97438_KCNK2_MOUSE_10090 and sp_Q920B6_KCNK2_RAT_10116 are exactly identical! WARNING: Sequences sp_P97438_KCNK2_MOUSE_10090 and tr_G3X1U8_G3X1U8_SARHA_9305 are exactly identical! WARNING: Sequences sp_P97438_KCNK2_MOUSE_10090 and tr_A0A3Q0DAX2_A0A3Q0DAX2_MESAU_10036 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_M3YAI8_M3YAI8_MUSPF_9669 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_A0A2I3HWH7_A0A2I3HWH7_NOMLE_61853 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_G3GUD3_G3GUD3_CRIGR_10029 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_A0A2I2ZGE2_A0A2I2ZGE2_GORGO_9595 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_Q6Q834_Q6Q834_RABIT_9986 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_J9NXS5_J9NXS5_CANLF_9615 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_H2Q8R2_H2Q8R2_PANTR_9598 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and sp_Q9JIS4_KCNKA_RAT_10116 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_H0WPV1_H0WPV1_OTOGA_30611 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_H0UY20_H0UY20_CAVPO_10141 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and sp_P57789_KCNKA_HUMAN_9606 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_F7HIE9_F7HIE9_MACMU_9544 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_G3TK42_G3TK42_LOXAF_9785 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_A0A2R8N2J0_A0A2R8N2J0_CALJA_9483 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_G7PB47_G7PB47_MACFA_9541 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_M3VWM2_M3VWM2_FELCA_9685 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_A0A2I3M1S6_A0A2I3M1S6_PAPAN_9555 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_A0A091CIK9_A0A091CIK9_FUKDA_885580 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_A0A0D9RGQ6_A0A0D9RGQ6_CHLSB_60711 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_A0A1U7TAC2_A0A1U7TAC2_TARSY_1868482 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_A0A1U7QLA3_A0A1U7QLA3_MESAU_10036 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_A0A2K5M1P6_A0A2K5M1P6_CERAT_9531 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_A0A2K6CW33_A0A2K6CW33_MACNE_9545 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_A0A2K5XB70_A0A2K5XB70_MANLE_9568 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_A0A2R8ZI00_A0A2R8ZI00_PANPA_9597 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_A0A2Y9DLC2_A0A2Y9DLC2_TRIMA_127582 are exactly identical! WARNING: Sequences tr_Q8BUW1_Q8BUW1_MOUSE_10090 and tr_A0A2Y9JJG0_A0A2Y9JJG0_ENHLU_391180 are exactly identical! WARNING: Sequences tr_Q9JK62_Q9JK62_MOUSE_10090 and tr_G3I2N9_G3I2N9_CRIGR_10029 are exactly identical! WARNING: Sequences tr_Q9JK62_Q9JK62_MOUSE_10090 and tr_A0A1U7RBC7_A0A1U7RBC7_MESAU_10036 are exactly identical! WARNING: Sequences tr_W5JL22_W5JL22_ANODA_43151 and tr_Q7QC61_Q7QC61_ANOGA_7165 are exactly identical! WARNING: Sequences tr_W5JL22_W5JL22_ANODA_43151 and tr_A0A084WRD3_A0A084WRD3_ANOSI_74873 are exactly identical! WARNING: Sequences tr_W5JWZ9_W5JWZ9_ANODA_43151 and tr_A0A084WIJ0_A0A084WIJ0_ANOSI_74873 are exactly identical! WARNING: Sequences tr_M3XS41_M3XS41_MUSPF_9669 and tr_G3N1D1_G3N1D1_BOVIN_9913 are exactly identical! WARNING: Sequences tr_M3XS41_M3XS41_MUSPF_9669 and tr_A0A337SI57_A0A337SI57_FELCA_9685 are exactly identical! WARNING: Sequences tr_M3XS41_M3XS41_MUSPF_9669 and tr_A0A2Y9JF15_A0A2Y9JF15_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3XS41_M3XS41_MUSPF_9669 and tr_A0A2Y9LNF6_A0A2Y9LNF6_DELLE_9749 are exactly identical! WARNING: Sequences tr_M3XS41_M3XS41_MUSPF_9669 and tr_A0A383YVV0_A0A383YVV0_BALAS_310752 are exactly identical! WARNING: Sequences tr_M3Y9X1_M3Y9X1_MUSPF_9669 and tr_G1NVA1_G1NVA1_MYOLU_59463 are exactly identical! WARNING: Sequences tr_M3Y9X1_M3Y9X1_MUSPF_9669 and tr_E2RAI2_E2RAI2_CANLF_9615 are exactly identical! WARNING: Sequences tr_M3Y9X1_M3Y9X1_MUSPF_9669 and tr_F7AUA1_F7AUA1_HORSE_9796 are exactly identical! WARNING: Sequences tr_M3Y9X1_M3Y9X1_MUSPF_9669 and tr_W5QCE5_W5QCE5_SHEEP_9940 are exactly identical! WARNING: Sequences tr_M3Y9X1_M3Y9X1_MUSPF_9669 and tr_A0A286ZMZ4_A0A286ZMZ4_PIG_9823 are exactly identical! WARNING: Sequences tr_M3Y9X1_M3Y9X1_MUSPF_9669 and tr_G1L5U0_G1L5U0_AILME_9646 are exactly identical! WARNING: Sequences tr_M3Y9X1_M3Y9X1_MUSPF_9669 and tr_E1BHX8_E1BHX8_BOVIN_9913 are exactly identical! WARNING: Sequences tr_M3Y9X1_M3Y9X1_MUSPF_9669 and tr_A0A337SLZ1_A0A337SLZ1_FELCA_9685 are exactly identical! WARNING: Sequences tr_M3Y9X1_M3Y9X1_MUSPF_9669 and tr_A0A2U3VJL9_A0A2U3VJL9_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3Y9X1_M3Y9X1_MUSPF_9669 and tr_A0A2U3YHN1_A0A2U3YHN1_LEPWE_9713 are exactly identical! WARNING: Sequences tr_M3Y9X1_M3Y9X1_MUSPF_9669 and tr_A0A2Y9K7H8_A0A2Y9K7H8_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3Y9X1_M3Y9X1_MUSPF_9669 and tr_A0A2Y9NAK8_A0A2Y9NAK8_DELLE_9749 are exactly identical! WARNING: Sequences tr_M3Y9X1_M3Y9X1_MUSPF_9669 and tr_A0A2Y9SEV9_A0A2Y9SEV9_PHYCD_9755 are exactly identical! WARNING: Sequences tr_M3Y9X1_M3Y9X1_MUSPF_9669 and tr_A0A384AVR1_A0A384AVR1_BALAS_310752 are exactly identical! WARNING: Sequences tr_M3YQR5_M3YQR5_MUSPF_9669 and tr_A0A2Y9JFS1_A0A2Y9JFS1_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YQT6_M3YQT6_MUSPF_9669 and tr_A0A2U3WR23_A0A2U3WR23_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3YQT6_M3YQT6_MUSPF_9669 and tr_A0A2U3Y4V4_A0A2U3Y4V4_LEPWE_9713 are exactly identical! WARNING: Sequences tr_M3YQT6_M3YQT6_MUSPF_9669 and tr_A0A2Y9JGB0_A0A2Y9JGB0_ENHLU_391180 are exactly identical! WARNING: Sequences tr_H2MDF3_H2MDF3_ORYLA_8090 and tr_G3P2F1_G3P2F1_GASAC_69293 are exactly identical! WARNING: Sequences tr_H2MDF3_H2MDF3_ORYLA_8090 and tr_A0A2I4D5Z4_A0A2I4D5Z4_9TELE_52670 are exactly identical! WARNING: Sequences tr_H2MDF3_H2MDF3_ORYLA_8090 and tr_A0A2U9BN18_A0A2U9BN18_SCOMX_52904 are exactly identical! WARNING: Sequences tr_B4JEL0_B4JEL0_DROGR_7222 and tr_B4LW19_B4LW19_DROVI_7244 are exactly identical! WARNING: Sequences tr_B4JEL0_B4JEL0_DROGR_7222 and tr_B4K4Z7_B4K4Z7_DROMO_7230 are exactly identical! WARNING: Sequences tr_A0A2I3HMD0_A0A2I3HMD0_NOMLE_61853 and tr_H2NM06_H2NM06_PONAB_9601 are exactly identical! WARNING: Sequences tr_A0A2I3HMD0_A0A2I3HMD0_NOMLE_61853 and tr_H0XZK3_H0XZK3_OTOGA_30611 are exactly identical! WARNING: Sequences tr_A0A2I3HMD0_A0A2I3HMD0_NOMLE_61853 and tr_G7PB58_G7PB58_MACFA_9541 are exactly identical! WARNING: Sequences tr_A0A2I3HMD0_A0A2I3HMD0_NOMLE_61853 and tr_A0A096NE39_A0A096NE39_PAPAN_9555 are exactly identical! WARNING: Sequences tr_A0A2I3HMD0_A0A2I3HMD0_NOMLE_61853 and tr_A0A2K5M2E5_A0A2K5M2E5_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A2I3HMD0_A0A2I3HMD0_NOMLE_61853 and tr_A0A2K6B7E4_A0A2K6B7E4_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A2I3HMD0_A0A2I3HMD0_NOMLE_61853 and tr_A0A2K6A0D0_A0A2K6A0D0_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1QL17_G1QL17_NOMLE_61853 and tr_A0A2I2ZP69_A0A2I2ZP69_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1QL17_G1QL17_NOMLE_61853 and tr_H2PR97_H2PR97_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1QL17_G1QL17_NOMLE_61853 and tr_A0A2J8LF96_A0A2J8LF96_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1QL17_G1QL17_NOMLE_61853 and sp_Q9NPC2_KCNK9_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1QL17_G1QL17_NOMLE_61853 and tr_F6VE51_F6VE51_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1QL17_G1QL17_NOMLE_61853 and tr_F6TNM6_F6TNM6_CALJA_9483 are exactly identical! WARNING: Sequences tr_G1QL17_G1QL17_NOMLE_61853 and tr_G1LEF7_G1LEF7_AILME_9646 are exactly identical! WARNING: Sequences tr_G1QL17_G1QL17_NOMLE_61853 and tr_G7PD09_G7PD09_MACFA_9541 are exactly identical! WARNING: Sequences tr_G1QL17_G1QL17_NOMLE_61853 and tr_A0A096MTG5_A0A096MTG5_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1QL17_G1QL17_NOMLE_61853 and tr_A0A0D9RB75_A0A0D9RB75_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G1QL17_G1QL17_NOMLE_61853 and tr_A0A1S3FVN6_A0A1S3FVN6_DIPOR_10020 are exactly identical! WARNING: Sequences tr_G1QL17_G1QL17_NOMLE_61853 and tr_A0A2K5P335_A0A2K5P335_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1QL17_G1QL17_NOMLE_61853 and tr_A0A2K6BQW2_A0A2K6BQW2_MACNE_9545 are exactly identical! WARNING: Sequences tr_G1QL17_G1QL17_NOMLE_61853 and tr_A0A2K5YGJ5_A0A2K5YGJ5_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1QL17_G1QL17_NOMLE_61853 and tr_A0A2R9C9H7_A0A2R9C9H7_PANPA_9597 are exactly identical! WARNING: Sequences tr_G1QL17_G1QL17_NOMLE_61853 and tr_A0A384BII4_A0A384BII4_URSMA_29073 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_G1P9U7_G1P9U7_MYOLU_59463 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_G3S7X7_G3S7X7_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_H2N3Q3_H2N3Q3_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_G1SVJ9_G1SVJ9_RABIT_9986 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_E2RHJ8_E2RHJ8_CANLF_9615 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_H2RCA8_H2RCA8_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_F6USZ5_F6USZ5_HORSE_9796 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_W5PEA1_W5PEA1_SHEEP_9940 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_I3MEY3_I3MEY3_ICTTR_43179 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_A0A286Y5B3_A0A286Y5B3_CAVPO_10141 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and sp_O95069_KCNK2_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_A0A1D5QMX8_A0A1D5QMX8_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_G3TZ44_G3TZ44_LOXAF_9785 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_F6UI26_F6UI26_CALJA_9483 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_I3LMT0_I3LMT0_PIG_9823 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_G1MBA2_G1MBA2_AILME_9646 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_G7NTZ8_G7NTZ8_MACFA_9541 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_Q8HY88_Q8HY88_BOVIN_9913 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_L5KXN7_L5KXN7_PTEAL_9402 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_A0A2I3M6N0_A0A2I3M6N0_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_A0A091D326_A0A091D326_FUKDA_885580 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_A0A0D9RSQ6_A0A0D9RSQ6_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_A0A1S3F2X7_A0A1S3F2X7_DIPOR_10020 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_A0A1U7UE23_A0A1U7UE23_TARSY_1868482 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_A0A2K5KVK4_A0A2K5KVK4_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_A0A2K6CLP8_A0A2K6CLP8_MACNE_9545 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_A0A2K6A9W2_A0A2K6A9W2_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_A0A2R9ACZ4_A0A2R9ACZ4_PANPA_9597 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_A0A2U4A0J5_A0A2U4A0J5_TURTR_9739 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_A0A2U3VP37_A0A2U3VP37_ODORO_9708 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_A0A2Y9PQ37_A0A2Y9PQ37_DELLE_9749 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_A0A2Y9TKJ6_A0A2Y9TKJ6_PHYCD_9755 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_A0A384CY13_A0A384CY13_URSMA_29073 are exactly identical! WARNING: Sequences tr_G1RW39_G1RW39_NOMLE_61853 and tr_A0A383ZKG1_A0A383ZKG1_BALAS_310752 are exactly identical! WARNING: Sequences tr_G1SBH5_G1SBH5_NOMLE_61853 and tr_A0A2I2Y603_A0A2I2Y603_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1SBH5_G1SBH5_NOMLE_61853 and tr_A0A1D5QJK2_A0A1D5QJK2_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1Q5S7_G1Q5S7_MYOLU_59463 and tr_G1LBL5_G1LBL5_AILME_9646 are exactly identical! WARNING: Sequences tr_G1Q5S7_G1Q5S7_MYOLU_59463 and tr_A0A337S561_A0A337S561_FELCA_9685 are exactly identical! WARNING: Sequences tr_G1Q5S7_G1Q5S7_MYOLU_59463 and tr_A0A2U3XSY6_A0A2U3XSY6_LEPWE_9713 are exactly identical! WARNING: Sequences tr_G1Q5S7_G1Q5S7_MYOLU_59463 and tr_A0A2Y9D9A9_A0A2Y9D9A9_TRIMA_127582 are exactly identical! WARNING: Sequences tr_G3QYK5_G3QYK5_GORGO_9595 and tr_H2Q8S1_H2Q8S1_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3QYK5_G3QYK5_GORGO_9595 and sp_Q9HB14_KCNKD_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3QYK5_G3QYK5_GORGO_9595 and tr_A0A0D9RGC6_A0A0D9RGC6_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G3QYK5_G3QYK5_GORGO_9595 and tr_A0A2R9C9D5_A0A2R9C9D5_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3SGQ1_G3SGQ1_GORGO_9595 and tr_A0A2R9CSF1_A0A2R9CSF1_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2NLZ2_H2NLZ2_PONAB_9601 and tr_F6URR0_F6URR0_HORSE_9796 are exactly identical! WARNING: Sequences tr_H2NLZ2_H2NLZ2_PONAB_9601 and tr_W5NYP0_W5NYP0_SHEEP_9940 are exactly identical! WARNING: Sequences tr_H2NLZ2_H2NLZ2_PONAB_9601 and tr_A0A287CZJ9_A0A287CZJ9_ICTTR_43179 are exactly identical! WARNING: Sequences tr_H2NLZ2_H2NLZ2_PONAB_9601 and tr_A0A287AIG4_A0A287AIG4_PIG_9823 are exactly identical! WARNING: Sequences tr_H2NLZ2_H2NLZ2_PONAB_9601 and tr_F1MLI5_F1MLI5_BOVIN_9913 are exactly identical! WARNING: Sequences tr_H2NLZ2_H2NLZ2_PONAB_9601 and tr_A0A2U4AG88_A0A2U4AG88_TURTR_9739 are exactly identical! WARNING: Sequences tr_H2NLZ2_H2NLZ2_PONAB_9601 and tr_A0A2Y9ND68_A0A2Y9ND68_DELLE_9749 are exactly identical! WARNING: Sequences tr_H2NLZ2_H2NLZ2_PONAB_9601 and tr_A0A2Y9EPC2_A0A2Y9EPC2_PHYCD_9755 are exactly identical! WARNING: Sequences tr_H2NLZ2_H2NLZ2_PONAB_9601 and tr_A0A384AN27_A0A384AN27_BALAS_310752 are exactly identical! WARNING: Sequences tr_H2P6R2_H2P6R2_PONAB_9601 and tr_A0A2I3T7P3_A0A2I3T7P3_PANTR_9598 are exactly identical! WARNING: Sequences tr_H2P6R2_H2P6R2_PONAB_9601 and sp_O14649_KCNK3_HUMAN_9606 are exactly identical! WARNING: Sequences tr_H2P6R2_H2P6R2_PONAB_9601 and tr_U3E948_U3E948_CALJA_9483 are exactly identical! WARNING: Sequences tr_H2P6R2_H2P6R2_PONAB_9601 and tr_G7PLU0_G7PLU0_MACFA_9541 are exactly identical! WARNING: Sequences tr_H2P6R2_H2P6R2_PONAB_9601 and tr_A0A096NYP9_A0A096NYP9_PAPAN_9555 are exactly identical! WARNING: Sequences tr_H2P6R2_H2P6R2_PONAB_9601 and tr_A0A0D9RA83_A0A0D9RA83_CHLSB_60711 are exactly identical! WARNING: Sequences tr_H2P6R2_H2P6R2_PONAB_9601 and tr_A0A2K5NYN3_A0A2K5NYN3_CERAT_9531 are exactly identical! WARNING: Sequences tr_H2P6R2_H2P6R2_PONAB_9601 and tr_A0A2K6E7Z5_A0A2K6E7Z5_MACNE_9545 are exactly identical! WARNING: Sequences tr_H2P6R2_H2P6R2_PONAB_9601 and tr_A0A2K5ZK51_A0A2K5ZK51_MANLE_9568 are exactly identical! WARNING: Sequences tr_H2P6R2_H2P6R2_PONAB_9601 and tr_A0A2R9BZU7_A0A2R9BZU7_PANPA_9597 are exactly identical! WARNING: Sequences sp_Q5RD07_KCNK1_PONAB_9601 and sp_O00180_KCNK1_HUMAN_9606 are exactly identical! WARNING: Sequences sp_Q5RD07_KCNK1_PONAB_9601 and tr_A0A2K5ZWM3_A0A2K5ZWM3_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1MY08_G1MY08_MELGA_9103 and tr_A0A0Q3LXI3_A0A0Q3LXI3_AMAAE_12930 are exactly identical! WARNING: Sequences tr_G1MY08_G1MY08_MELGA_9103 and tr_A0A091JSZ7_A0A091JSZ7_EGRGA_188379 are exactly identical! WARNING: Sequences tr_G1MY08_G1MY08_MELGA_9103 and tr_A0A091WZC4_A0A091WZC4_NIPNI_128390 are exactly identical! WARNING: Sequences tr_G1MY08_G1MY08_MELGA_9103 and tr_A0A087R7L2_A0A087R7L2_APTFO_9233 are exactly identical! WARNING: Sequences tr_G1MY08_G1MY08_MELGA_9103 and tr_A0A093HCH1_A0A093HCH1_STRCA_441894 are exactly identical! WARNING: Sequences tr_G1MY08_G1MY08_MELGA_9103 and tr_A0A091W357_A0A091W357_OPIHO_30419 are exactly identical! WARNING: Sequences tr_G1MY08_G1MY08_MELGA_9103 and tr_A0A099ZFB8_A0A099ZFB8_TINGU_94827 are exactly identical! WARNING: Sequences tr_G1MY08_G1MY08_MELGA_9103 and tr_A0A091GIR1_A0A091GIR1_9AVES_55661 are exactly identical! WARNING: Sequences tr_G1MY08_G1MY08_MELGA_9103 and tr_A0A099ZVX6_A0A099ZVX6_CHAVO_50402 are exactly identical! WARNING: Sequences tr_G1MY08_G1MY08_MELGA_9103 and tr_A0A2I0M276_A0A2I0M276_COLLI_8932 are exactly identical! WARNING: Sequences tr_G1MY08_G1MY08_MELGA_9103 and tr_A0A093FXS7_A0A093FXS7_DRYPU_118200 are exactly identical! WARNING: Sequences tr_G1MY08_G1MY08_MELGA_9103 and tr_A0A091HQ04_A0A091HQ04_CALAN_9244 are exactly identical! WARNING: Sequences tr_G1MY08_G1MY08_MELGA_9103 and tr_A0A1V4KKW6_A0A1V4KKW6_PATFA_372326 are exactly identical! WARNING: Sequences tr_G1NR08_G1NR08_MELGA_9103 and tr_A0A091J869_A0A091J869_EGRGA_188379 are exactly identical! WARNING: Sequences tr_G1NR08_G1NR08_MELGA_9103 and tr_A0A091UQE1_A0A091UQE1_NIPNI_128390 are exactly identical! WARNING: Sequences tr_G1NR08_G1NR08_MELGA_9103 and tr_A0A087R507_A0A087R507_APTFO_9233 are exactly identical! WARNING: Sequences tr_G1NR08_G1NR08_MELGA_9103 and tr_A0A093J7K3_A0A093J7K3_STRCA_441894 are exactly identical! WARNING: Sequences tr_G1NR08_G1NR08_MELGA_9103 and tr_A0A091WAG2_A0A091WAG2_OPIHO_30419 are exactly identical! WARNING: Sequences tr_G1NR08_G1NR08_MELGA_9103 and tr_A0A099ZPP5_A0A099ZPP5_TINGU_94827 are exactly identical! WARNING: Sequences tr_G1NR08_G1NR08_MELGA_9103 and tr_A0A099ZZF6_A0A099ZZF6_CHAVO_50402 are exactly identical! WARNING: Sequences tr_G1NR08_G1NR08_MELGA_9103 and tr_A0A226MJK4_A0A226MJK4_CALSU_9009 are exactly identical! WARNING: Sequences tr_G3UQ81_G3UQ81_MELGA_9103 and tr_A0A091V850_A0A091V850_NIPNI_128390 are exactly identical! WARNING: Sequences tr_G3UQ81_G3UQ81_MELGA_9103 and tr_A0A087QU41_A0A087QU41_APTFO_9233 are exactly identical! WARNING: Sequences tr_G3UQ81_G3UQ81_MELGA_9103 and tr_A0A091V637_A0A091V637_OPIHO_30419 are exactly identical! WARNING: Sequences tr_G3UQ81_G3UQ81_MELGA_9103 and tr_A0A226MZ99_A0A226MZ99_CALSU_9009 are exactly identical! WARNING: Sequences tr_G3UQ81_G3UQ81_MELGA_9103 and tr_A0A226PGC5_A0A226PGC5_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A0R3NI26_A0A0R3NI26_DROPS_46245 and tr_B4G2U5_B4G2U5_DROPE_7234 are exactly identical! WARNING: Sequences tr_Q29BM1_Q29BM1_DROPS_46245 and tr_B4GP60_B4GP60_DROPE_7234 are exactly identical! WARNING: Sequences sp_O17185_SUP9_CAEEL_6239 and tr_E3M1Y3_E3M1Y3_CAERE_31234 are exactly identical! WARNING: Sequences sp_O17185_SUP9_CAEEL_6239 and tr_A0A1I7UJN1_A0A1I7UJN1_9PELO_1561998 are exactly identical! WARNING: Sequences tr_F1PTD7_F1PTD7_CANLF_9615 and tr_I3MUN7_I3MUN7_ICTTR_43179 are exactly identical! WARNING: Sequences tr_F1PTD7_F1PTD7_CANLF_9615 and tr_G3TWA3_G3TWA3_LOXAF_9785 are exactly identical! WARNING: Sequences tr_F1PTD7_F1PTD7_CANLF_9615 and tr_A0A1S3AAX3_A0A1S3AAX3_ERIEU_9365 are exactly identical! WARNING: Sequences tr_F1PTD7_F1PTD7_CANLF_9615 and tr_A0A2U3WB51_A0A2U3WB51_ODORO_9708 are exactly identical! WARNING: Sequences tr_F1PTD7_F1PTD7_CANLF_9615 and tr_A0A2Y9E6N5_A0A2Y9E6N5_TRIMA_127582 are exactly identical! WARNING: Sequences tr_H2QKE7_H2QKE7_PANTR_9598 and tr_A0A2R9AYE4_A0A2R9AYE4_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2QSY2_H2QSY2_PANTR_9598 and tr_A0A096NHZ8_A0A096NHZ8_PAPAN_9555 are exactly identical! WARNING: Sequences tr_H2QSY2_H2QSY2_PANTR_9598 and tr_A0A0D9RF49_A0A0D9RF49_CHLSB_60711 are exactly identical! WARNING: Sequences tr_H2QSY2_H2QSY2_PANTR_9598 and tr_A0A2K5NZ26_A0A2K5NZ26_CERAT_9531 are exactly identical! WARNING: Sequences tr_H2QSY2_H2QSY2_PANTR_9598 and tr_A0A2K5YIW5_A0A2K5YIW5_MANLE_9568 are exactly identical! WARNING: Sequences tr_F7CTJ6_F7CTJ6_MONDO_13616 and tr_G3WUD4_G3WUD4_SARHA_9305 are exactly identical! WARNING: Sequences tr_F6VJB9_F6VJB9_HORSE_9796 and tr_A0A1U7U988_A0A1U7U988_TARSY_1868482 are exactly identical! WARNING: Sequences tr_B0WAG7_B0WAG7_CULQU_7176 and tr_Q172H0_Q172H0_AEDAE_7159 are exactly identical! WARNING: Sequences tr_A0A3B5QV10_A0A3B5QV10_XIPMA_8083 and tr_A0A087Y5S7_A0A087Y5S7_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A3B5R7W6_A0A3B5R7W6_XIPMA_8083 and tr_A0A087XYD0_A0A087XYD0_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4A673_M4A673_XIPMA_8083 and tr_A0A087XNA7_A0A087XNA7_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4ACA1_M4ACA1_XIPMA_8083 and tr_A0A087Y4F8_A0A087Y4F8_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4ACA1_M4ACA1_XIPMA_8083 and tr_A0A1S3M415_A0A1S3M415_SALSA_8030 are exactly identical! WARNING: Sequences tr_M4ACA1_M4ACA1_XIPMA_8083 and tr_A0A060XUC7_A0A060XUC7_ONCMY_8022 are exactly identical! WARNING: Sequences tr_M4ACA1_M4ACA1_XIPMA_8083 and tr_A0A060ZDZ0_A0A060ZDZ0_ONCMY_8022 are exactly identical! WARNING: Sequences tr_M4AL26_M4AL26_XIPMA_8083 and tr_A0A087Y7M5_A0A087Y7M5_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A088A5T7_A0A088A5T7_APIME_7460 and tr_A0A2A3EKK6_A0A2A3EKK6_APICC_94128 are exactly identical! WARNING: Sequences tr_A0A088AFX5_A0A088AFX5_APIME_7460 and tr_A0A0M9ACR9_A0A0M9ACR9_9HYME_166423 are exactly identical! WARNING: Sequences tr_A0A088AFX5_A0A088AFX5_APIME_7460 and tr_A0A2A3EPR3_A0A2A3EPR3_APICC_94128 are exactly identical! WARNING: Sequences tr_A0A158NCQ9_A0A158NCQ9_ATTCE_12957 and tr_A0A151XCK4_A0A151XCK4_9HYME_64791 are exactly identical! WARNING: Sequences tr_A0A158NCQ9_A0A158NCQ9_ATTCE_12957 and tr_A0A151J9F5_A0A151J9F5_9HYME_471704 are exactly identical! WARNING: Sequences tr_A0A158NCQ9_A0A158NCQ9_ATTCE_12957 and tr_A0A151I2T9_A0A151I2T9_9HYME_520822 are exactly identical! WARNING: Sequences tr_A0A158NCQ9_A0A158NCQ9_ATTCE_12957 and tr_A0A195CMP3_A0A195CMP3_9HYME_456900 are exactly identical! WARNING: Sequences tr_A0A158NRK3_A0A158NRK3_ATTCE_12957 and tr_F4WBR0_F4WBR0_ACREC_103372 are exactly identical! WARNING: Sequences tr_A0A158NRK3_A0A158NRK3_ATTCE_12957 and tr_A0A195BD47_A0A195BD47_9HYME_520822 are exactly identical! WARNING: Sequences tr_A0A158NRK3_A0A158NRK3_ATTCE_12957 and tr_A0A195FU61_A0A195FU61_9HYME_34720 are exactly identical! WARNING: Sequences tr_I3IZL5_I3IZL5_ORENI_8128 and tr_A0A2U9CSL7_A0A2U9CSL7_SCOMX_52904 are exactly identical! WARNING: Sequences tr_I3JF97_I3JF97_ORENI_8128 and tr_A0A2U9CUA0_A0A2U9CUA0_SCOMX_52904 are exactly identical! WARNING: Sequences tr_I3JL72_I3JL72_ORENI_8128 and tr_A0A1S3Q031_A0A1S3Q031_SALSA_8030 are exactly identical! WARNING: Sequences tr_I3LVV6_I3LVV6_ICTTR_43179 and tr_G3T8M7_G3T8M7_LOXAF_9785 are exactly identical! WARNING: Sequences tr_I3LVV6_I3LVV6_ICTTR_43179 and tr_A0A2Y9DN91_A0A2Y9DN91_TRIMA_127582 are exactly identical! WARNING: Sequences tr_H0WL61_H0WL61_OTOGA_30611 and tr_A0A2U4CJ59_A0A2U4CJ59_TURTR_9739 are exactly identical! WARNING: Sequences tr_H0XA45_H0XA45_OTOGA_30611 and tr_H0W2L4_H0W2L4_CAVPO_10141 are exactly identical! WARNING: Sequences tr_H0XA45_H0XA45_OTOGA_30611 and sp_Q9JL58_KCNK9_CAVPO_10141 are exactly identical! WARNING: Sequences tr_H0XA45_H0XA45_OTOGA_30611 and tr_G5C6R9_G5C6R9_HETGA_10181 are exactly identical! WARNING: Sequences tr_H0XA45_H0XA45_OTOGA_30611 and tr_A0A091DL23_A0A091DL23_FUKDA_885580 are exactly identical! WARNING: Sequences tr_E5SI00_E5SI00_TRISP_6334 and tr_A0A0V0SJL0_A0A0V0SJL0_9BILA_6336 are exactly identical! WARNING: Sequences tr_E5SI00_E5SI00_TRISP_6334 and tr_A0A0V1CJV9_A0A0V1CJV9_TRIBR_45882 are exactly identical! WARNING: Sequences tr_E5SI00_E5SI00_TRISP_6334 and tr_A0A0V0WVL5_A0A0V0WVL5_9BILA_92179 are exactly identical! WARNING: Sequences tr_E5SI00_E5SI00_TRISP_6334 and tr_A0A0V0V8W6_A0A0V0V8W6_9BILA_181606 are exactly identical! WARNING: Sequences tr_E5SI00_E5SI00_TRISP_6334 and tr_A0A0V1LRU8_A0A0V1LRU8_9BILA_6335 are exactly identical! WARNING: Sequences tr_E5SI00_E5SI00_TRISP_6334 and tr_A0A0V1AFH4_A0A0V1AFH4_9BILA_990121 are exactly identical! WARNING: Sequences tr_E5SI00_E5SI00_TRISP_6334 and tr_A0A0V1MXZ7_A0A0V1MXZ7_9BILA_268474 are exactly identical! WARNING: Sequences tr_E5SI00_E5SI00_TRISP_6334 and tr_A0A0V1P833_A0A0V1P833_9BILA_92180 are exactly identical! WARNING: Sequences tr_E5SI00_E5SI00_TRISP_6334 and tr_A0A0V1HQ45_A0A0V1HQ45_9BILA_268475 are exactly identical! WARNING: Sequences tr_E5SI00_E5SI00_TRISP_6334 and tr_A0A0V0U3P5_A0A0V0U3P5_9BILA_144512 are exactly identical! WARNING: Sequences tr_E5SJG5_E5SJG5_TRISP_6334 and tr_A0A0V0SAX2_A0A0V0SAX2_9BILA_6336 are exactly identical! WARNING: Sequences tr_E5SJG5_E5SJG5_TRISP_6334 and tr_A0A0V1D884_A0A0V1D884_TRIBR_45882 are exactly identical! WARNING: Sequences tr_E5SJG5_E5SJG5_TRISP_6334 and tr_A0A0V0WVG0_A0A0V0WVG0_9BILA_92179 are exactly identical! WARNING: Sequences tr_E5SJG5_E5SJG5_TRISP_6334 and tr_A0A0V0UUI6_A0A0V0UUI6_9BILA_181606 are exactly identical! WARNING: Sequences tr_E5SJG5_E5SJG5_TRISP_6334 and tr_A0A0V1L252_A0A0V1L252_9BILA_6335 are exactly identical! WARNING: Sequences tr_E5SJG5_E5SJG5_TRISP_6334 and tr_A0A0V0ZZ58_A0A0V0ZZ58_9BILA_990121 are exactly identical! WARNING: Sequences tr_E5SJG5_E5SJG5_TRISP_6334 and tr_A0A0V1PCT3_A0A0V1PCT3_9BILA_92180 are exactly identical! WARNING: Sequences tr_H0YXG7_H0YXG7_TAEGU_59729 and tr_U3KCS5_U3KCS5_FICAL_59894 are exactly identical! WARNING: Sequences tr_H0YXG7_H0YXG7_TAEGU_59729 and tr_A0A091EJ50_A0A091EJ50_CORBR_85066 are exactly identical! WARNING: Sequences tr_H0YXG7_H0YXG7_TAEGU_59729 and tr_A0A093T330_A0A093T330_9PASS_328815 are exactly identical! WARNING: Sequences tr_H0YXG7_H0YXG7_TAEGU_59729 and tr_A0A218V421_A0A218V421_9PASE_299123 are exactly identical! WARNING: Sequences tr_H0Z444_H0Z444_TAEGU_59729 and tr_A0A091EU25_A0A091EU25_CORBR_85066 are exactly identical! WARNING: Sequences tr_H0Z444_H0Z444_TAEGU_59729 and tr_A0A093PLT5_A0A093PLT5_9PASS_328815 are exactly identical! WARNING: Sequences tr_H0Z444_H0Z444_TAEGU_59729 and tr_A0A218USS6_A0A218USS6_9PASE_299123 are exactly identical! WARNING: Sequences tr_H0ZIV7_H0ZIV7_TAEGU_59729 and tr_A0A218VAV8_A0A218VAV8_9PASE_299123 are exactly identical! WARNING: Sequences tr_H0ZQC3_H0ZQC3_TAEGU_59729 and tr_A0A218UN57_A0A218UN57_9PASE_299123 are exactly identical! WARNING: Sequences tr_F7AVD9_F7AVD9_XENTR_8364 and tr_A0A1L8G6D1_A0A1L8G6D1_XENLA_8355 are exactly identical! WARNING: Sequences tr_F7DCV3_F7DCV3_XENTR_8364 and tr_A0A1L8EKT7_A0A1L8EKT7_XENLA_8355 are exactly identical! WARNING: Sequences tr_B3SA79_B3SA79_TRIAD_10228 and tr_A0A369RQI6_A0A369RQI6_9METZ_287889 are exactly identical! WARNING: Sequences tr_L5KJ28_L5KJ28_PTEAL_9402 and tr_A0A2U3XRQ9_A0A2U3XRQ9_LEPWE_9713 are exactly identical! WARNING: Sequences tr_A0A0K0G4J0_A0A0K0G4J0_STRVS_75913 and tr_A0A0K0EAV3_A0A0K0EAV3_STRER_6248 are exactly identical! WARNING: Sequences tr_A0A0K0G4J0_A0A0K0G4J0_STRVS_75913 and tr_A0A0N5B4H4_A0A0N5B4H4_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A151LZN7_A0A151LZN7_ALLMI_8496 and tr_A0A1U7SDX3_A0A1U7SDX3_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A151NZD7_A0A151NZD7_ALLMI_8496 and tr_A0A1U8DHX9_A0A1U8DHX9_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A151P3K6_A0A151P3K6_ALLMI_8496 and tr_A0A3Q0H4N0_A0A3Q0H4N0_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A151P9W5_A0A151P9W5_ALLMI_8496 and tr_A0A1U7S9M0_A0A1U7S9M0_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A194RL23_A0A194RL23_PAPMA_76193 and tr_A0A194Q7V6_A0A194Q7V6_PAPXU_66420 are exactly identical! WARNING: Sequences tr_A0A2I0LHG0_A0A2I0LHG0_COLLI_8932 and tr_A0A091IFE6_A0A091IFE6_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A2I0MP70_A0A2I0MP70_COLLI_8932 and tr_A0A1V4KB33_A0A1V4KB33_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A2I0MPA4_A0A2I0MPA4_COLLI_8932 and tr_A0A1V4KAF2_A0A1V4KAF2_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A1S3JIP3_A0A1S3JIP3_LINUN_7574 and tr_A0A1S3JIR4_A0A1S3JIR4_LINUN_7574 are exactly identical! WARNING: Sequences tr_A0A1S3JIP3_A0A1S3JIP3_LINUN_7574 and tr_A0A1S3JK27_A0A1S3JK27_LINUN_7574 are exactly identical! WARNING: Sequences tr_A0A1S3KG06_A0A1S3KG06_LINUN_7574 and tr_A0A2R2MMP2_A0A2R2MMP2_LINUN_7574 are exactly identical! WARNING: Sequences tr_A0A1S3L0T4_A0A1S3L0T4_SALSA_8030 and tr_A0A060WE95_A0A060WE95_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3MBH3_A0A1S3MBH3_SALSA_8030 and tr_A0A1S3SAR9_A0A1S3SAR9_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3MBH3_A0A1S3MBH3_SALSA_8030 and tr_A0A060WG27_A0A060WG27_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3MDD7_A0A1S3MDD7_SALSA_8030 and tr_A0A060WZS3_A0A060WZS3_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3P250_A0A1S3P250_SALSA_8030 and tr_A0A060WAD3_A0A060WAD3_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3Q821_A0A1S3Q821_SALSA_8030 and tr_A0A060XHU8_A0A060XHU8_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3S963_A0A1S3S963_SALSA_8030 and tr_A0A060VPE1_A0A060VPE1_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A0M3QYA8_A0A0M3QYA8_DROBS_30019 and tr_A0A0M4F2G7_A0A0M4F2G7_DROBS_30019 are exactly identical! WARNING: Sequences tr_A0A226MP98_A0A226MP98_CALSU_9009 and tr_A0A226NWN5_A0A226NWN5_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2A2K7G6_A0A2A2K7G6_9BILA_2018661 and tr_A0A2A2KPJ7_A0A2A2KPJ7_9BILA_2018661 are exactly identical! WARNING: Sequences tr_A0A2D0RNL8_A0A2D0RNL8_ICTPU_7998 and tr_A0A2D0RQ70_A0A2D0RQ70_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0SGM2_A0A2D0SGM2_ICTPU_7998 and tr_A0A2D0SHA1_A0A2D0SHA1_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0SGM2_A0A2D0SGM2_ICTPU_7998 and tr_A0A2D0SHV4_A0A2D0SHV4_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2U4C1I8_A0A2U4C1I8_TURTR_9739 and tr_A0A2Y9PZB3_A0A2Y9PZB3_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2Y9NU08_A0A2Y9NU08_DELLE_9749 and tr_A0A2Y9FV07_A0A2Y9FV07_PHYCD_9755 are exactly identical! WARNING: Duplicate sequences found: 337 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O14649/3_mltree/O14649.raxml.reduced.phy Alignment comprises 1 partitions and 119 patterns Partition 0: noname Model: LG4X+R4 Alignment sites / patterns: 119 / 119 Gaps: 2.46 % Invariant sites: 0.00 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O14649/3_mltree/O14649.raxml.rba Parallelization scheme autoconfig: 2 worker(s) x 1 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Generating 20 random starting tree(s) with 993 taxa [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 119 / 9520 [00:00:00] Data distribution: max. searches per worker: 10 Starting ML tree search with 20 distinct starting trees [00:00:00 -203250.474285] Initial branch length optimization [00:00:03 -159661.844229] Model parameter optimization (eps = 10.000000) [00:00:49 -158990.006624] AUTODETECT spr round 1 (radius: 5) [00:02:53 -92505.862314] AUTODETECT spr round 2 (radius: 10) [00:05:03 -61572.256508] AUTODETECT spr round 3 (radius: 15) [00:07:08 -50522.034982] AUTODETECT spr round 4 (radius: 20) [00:09:24 -42026.031824] AUTODETECT spr round 5 (radius: 25) [00:12:01 -39267.319827] SPR radius for FAST iterations: 25 (autodetect) [00:12:01 -39267.319827] Model parameter optimization (eps = 3.000000) [00:12:27 -39254.703044] FAST spr round 1 (radius: 25) [00:14:24 -30761.941013] FAST spr round 2 (radius: 25) [00:16:05 -28947.506377] FAST spr round 3 (radius: 25) [00:17:35 -28673.471483] FAST spr round 4 (radius: 25) [00:19:03 -28649.470554] FAST spr round 5 (radius: 25) [00:20:24 -28648.297589] FAST spr round 6 (radius: 25) [00:21:45 -28647.389415] FAST spr round 7 (radius: 25) [00:23:04 -28647.389399] Model parameter optimization (eps = 1.000000) [00:23:20 -28630.736776] SLOW spr round 1 (radius: 5) [00:24:54 -28616.921445] SLOW spr round 2 (radius: 5) [00:26:30 -28614.608512] SLOW spr round 3 (radius: 5) [00:28:06 -28612.616235] SLOW spr round 4 (radius: 5) [00:29:42 -28612.080945] SLOW spr round 5 (radius: 5) [00:31:18 -28612.080714] SLOW spr round 6 (radius: 10) [00:32:59 -28612.078560] SLOW spr round 7 (radius: 15) [00:35:18 -28611.289319] SLOW spr round 8 (radius: 5) [00:37:23 -28610.654887] SLOW spr round 9 (radius: 5) [00:39:18 -28610.654498] SLOW spr round 10 (radius: 10) [00:41:04 -28609.039700] SLOW spr round 11 (radius: 5) [00:42:59 -28609.039547] SLOW spr round 12 (radius: 10) [00:44:47 -28609.039460] SLOW spr round 13 (radius: 15) [00:46:55 -28609.039422] SLOW spr round 14 (radius: 20) [00:49:53 -28608.949061] SLOW spr round 15 (radius: 25) [00:53:06] [worker #1] ML tree search #2, logLikelihood: -28595.246878 [00:53:46 -28608.098504] SLOW spr round 16 (radius: 5) [00:55:50 -28607.831147] SLOW spr round 17 (radius: 5) [00:57:40 -28607.831099] SLOW spr round 18 (radius: 10) [00:59:23 -28607.831083] SLOW spr round 19 (radius: 15) [01:01:32 -28607.831083] SLOW spr round 20 (radius: 20) [01:04:32 -28607.831083] SLOW spr round 21 (radius: 25) [01:08:27 -28607.831083] Model parameter optimization (eps = 0.100000) [01:08:35] [worker #0] ML tree search #1, logLikelihood: -28607.511382 [01:08:35 -202673.742286] Initial branch length optimization [01:08:38 -158053.880601] Model parameter optimization (eps = 10.000000) [01:09:14 -157524.618855] AUTODETECT spr round 1 (radius: 5) [01:11:16 -92638.941913] AUTODETECT spr round 2 (radius: 10) [01:13:21 -62494.292715] AUTODETECT spr round 3 (radius: 15) [01:15:29 -50344.828850] AUTODETECT spr round 4 (radius: 20) [01:17:54 -41505.540434] AUTODETECT spr round 5 (radius: 25) [01:20:20 -37151.657519] SPR radius for FAST iterations: 25 (autodetect) [01:20:20 -37151.657519] Model parameter optimization (eps = 3.000000) [01:20:39 -37141.122216] FAST spr round 1 (radius: 25) [01:22:29 -29786.770938] FAST spr round 2 (radius: 25) [01:24:03 -29127.348320] FAST spr round 3 (radius: 25) [01:25:31 -29072.580842] FAST spr round 4 (radius: 25) [01:26:57 -29046.338957] FAST spr round 5 (radius: 25) [01:28:24 -28861.042371] FAST spr round 6 (radius: 25) [01:29:47 -28724.842474] FAST spr round 7 (radius: 25) [01:31:11 -28649.075212] FAST spr round 8 (radius: 25) [01:32:31 -28649.074901] Model parameter optimization (eps = 1.000000) [01:32:45 -28645.994340] SLOW spr round 1 (radius: 5) [01:34:19 -28635.490526] SLOW spr round 2 (radius: 5) [01:35:55 -28635.116505] SLOW spr round 3 (radius: 5) [01:37:31 -28634.999516] SLOW spr round 4 (radius: 5) [01:39:04 -28634.999111] SLOW spr round 5 (radius: 10) [01:40:45 -28631.109761] SLOW spr round 6 (radius: 5) [01:42:43 -28631.107027] SLOW spr round 7 (radius: 10) [01:44:32 -28631.105114] SLOW spr round 8 (radius: 15) [01:46:42 -28631.103877] SLOW spr round 9 (radius: 20) [01:49:36 -28631.102887] SLOW spr round 10 (radius: 25) [01:53:32 -28630.932947] SLOW spr round 11 (radius: 5) [01:55:38 -28630.932161] SLOW spr round 12 (radius: 10) [01:57:34 -28630.931632] SLOW spr round 13 (radius: 15) [01:59:44 -28630.931210] SLOW spr round 14 (radius: 20) [02:02:39 -28605.111961] SLOW spr round 15 (radius: 5) [02:04:44 -28605.111773] SLOW spr round 16 (radius: 10) [02:06:38 -28605.111624] SLOW spr round 17 (radius: 15) [02:06:57] [worker #1] ML tree search #4, logLikelihood: -28603.873714 [02:08:48 -28605.111501] SLOW spr round 18 (radius: 20) [02:11:43 -28605.111399] SLOW spr round 19 (radius: 25) [02:15:39 -28605.111313] Model parameter optimization (eps = 0.100000) [02:15:53] [worker #0] ML tree search #3, logLikelihood: -28604.235434 [02:15:53 -201075.440375] Initial branch length optimization [02:15:55 -156586.171257] Model parameter optimization (eps = 10.000000) [02:16:34 -155951.777402] AUTODETECT spr round 1 (radius: 5) [02:18:35 -93306.708530] AUTODETECT spr round 2 (radius: 10) [02:20:51 -63347.864678] AUTODETECT spr round 3 (radius: 15) [02:22:57 -48671.204116] AUTODETECT spr round 4 (radius: 20) [02:25:15 -44701.348632] AUTODETECT spr round 5 (radius: 25) [02:27:54 -40326.553861] SPR radius for FAST iterations: 25 (autodetect) [02:27:54 -40326.553861] Model parameter optimization (eps = 3.000000) [02:28:11 -40306.299654] FAST spr round 1 (radius: 25) [02:30:09 -31692.346655] FAST spr round 2 (radius: 25) [02:31:47 -30041.267962] FAST spr round 3 (radius: 25) [02:33:20 -29251.757398] FAST spr round 4 (radius: 25) [02:34:50 -28710.707898] FAST spr round 5 (radius: 25) [02:36:20 -28641.616024] FAST spr round 6 (radius: 25) [02:37:46 -28630.010423] FAST spr round 7 (radius: 25) [02:39:08 -28630.008548] Model parameter optimization (eps = 1.000000) [02:39:25 -28619.823269] SLOW spr round 1 (radius: 5) [02:41:01 -28614.915525] SLOW spr round 2 (radius: 5) [02:42:40 -28614.894928] SLOW spr round 3 (radius: 10) [02:44:24 -28613.999443] SLOW spr round 4 (radius: 5) [02:46:26 -28613.825934] SLOW spr round 5 (radius: 5) [02:48:18 -28613.825569] SLOW spr round 6 (radius: 10) [02:50:04 -28612.986790] SLOW spr round 7 (radius: 5) [02:52:03 -28612.986282] SLOW spr round 8 (radius: 10) [02:53:51 -28612.986148] SLOW spr round 9 (radius: 15) [02:55:59 -28608.635461] SLOW spr round 10 (radius: 5) [02:58:03 -28608.635369] SLOW spr round 11 (radius: 10) [02:59:55 -28608.635310] SLOW spr round 12 (radius: 15) [03:02:00 -28608.635258] SLOW spr round 13 (radius: 20) [03:04:32 -28608.635224] SLOW spr round 14 (radius: 25) [03:07:37 -28608.635197] Model parameter optimization (eps = 0.100000) [03:07:47] [worker #0] ML tree search #5, logLikelihood: -28608.146237 [03:07:47 -204033.333940] Initial branch length optimization [03:07:50 -158515.535468] Model parameter optimization (eps = 10.000000) [03:08:23 -157912.891571] AUTODETECT spr round 1 (radius: 5) [03:10:28 -93932.239397] AUTODETECT spr round 2 (radius: 10) [03:12:32 -63362.801742] AUTODETECT spr round 3 (radius: 15) [03:14:37 -50095.206807] AUTODETECT spr round 4 (radius: 20) [03:16:51 -41826.885305] AUTODETECT spr round 5 (radius: 25) [03:19:18 -37071.518722] SPR radius for FAST iterations: 25 (autodetect) [03:19:18 -37071.518722] Model parameter optimization (eps = 3.000000) [03:19:41 -37054.918160] FAST spr round 1 (radius: 25) [03:21:36 -29960.843403] FAST spr round 2 (radius: 25) [03:23:13 -28857.172710] FAST spr round 3 (radius: 25) [03:23:37] [worker #1] ML tree search #6, logLikelihood: -28597.474846 [03:24:42 -28634.751194] FAST spr round 4 (radius: 25) [03:26:08 -28630.529665] FAST spr round 5 (radius: 25) [03:27:29 -28630.529325] Model parameter optimization (eps = 1.000000) [03:27:43 -28627.946166] SLOW spr round 1 (radius: 5) [03:29:19 -28624.710184] SLOW spr round 2 (radius: 5) [03:30:56 -28621.063849] SLOW spr round 3 (radius: 5) [03:32:33 -28620.632085] SLOW spr round 4 (radius: 5) [03:34:11 -28620.631748] SLOW spr round 5 (radius: 10) [03:35:52 -28620.264736] SLOW spr round 6 (radius: 5) [03:37:54 -28620.264555] SLOW spr round 7 (radius: 10) [03:39:49 -28620.264460] SLOW spr round 8 (radius: 15) [03:42:02 -28620.264417] SLOW spr round 9 (radius: 20) [03:45:02 -28620.264363] SLOW spr round 10 (radius: 25) [03:48:54 -28620.264350] Model parameter optimization (eps = 0.100000) [03:49:05] [worker #0] ML tree search #7, logLikelihood: -28619.997099 [03:49:05 -200410.656002] Initial branch length optimization [03:49:08 -156315.429350] Model parameter optimization (eps = 10.000000) [03:49:50 -155698.575391] AUTODETECT spr round 1 (radius: 5) [03:51:51 -92205.593110] AUTODETECT spr round 2 (radius: 10) [03:54:04 -61546.404625] AUTODETECT spr round 3 (radius: 15) [03:56:11 -50442.832900] AUTODETECT spr round 4 (radius: 20) [03:58:42 -42131.192413] AUTODETECT spr round 5 (radius: 25) [04:01:29 -36469.181695] SPR radius for FAST iterations: 25 (autodetect) [04:01:29 -36469.181695] Model parameter optimization (eps = 3.000000) [04:01:51 -36434.702964] FAST spr round 1 (radius: 25) [04:03:54 -29247.826410] FAST spr round 2 (radius: 25) [04:05:34 -28685.243036] FAST spr round 3 (radius: 25) [04:07:07 -28653.025698] FAST spr round 4 (radius: 25) [04:08:36 -28636.162710] FAST spr round 5 (radius: 25) [04:10:00 -28631.946309] FAST spr round 6 (radius: 25) [04:10:41] [worker #1] ML tree search #8, logLikelihood: -28648.629831 [04:11:24 -28631.945861] Model parameter optimization (eps = 1.000000) [04:11:38 -28629.479526] SLOW spr round 1 (radius: 5) [04:13:16 -28624.824987] SLOW spr round 2 (radius: 5) [04:14:55 -28623.039523] SLOW spr round 3 (radius: 5) [04:16:31 -28622.938256] SLOW spr round 4 (radius: 5) [04:18:04 -28622.938239] SLOW spr round 5 (radius: 10) [04:19:45 -28618.538333] SLOW spr round 6 (radius: 5) [04:21:46 -28616.927009] SLOW spr round 7 (radius: 5) [04:23:35 -28616.927007] SLOW spr round 8 (radius: 10) [04:25:20 -28611.914200] SLOW spr round 9 (radius: 5) [04:27:20 -28611.914051] SLOW spr round 10 (radius: 10) [04:29:09 -28611.914048] SLOW spr round 11 (radius: 15) [04:31:21 -28611.764920] SLOW spr round 12 (radius: 5) [04:33:27 -28611.764594] SLOW spr round 13 (radius: 10) [04:35:21 -28611.764590] SLOW spr round 14 (radius: 15) [04:37:32 -28611.764590] SLOW spr round 15 (radius: 20) [04:40:30 -28611.764589] SLOW spr round 16 (radius: 25) [04:44:21 -28597.824003] SLOW spr round 17 (radius: 5) [04:46:31 -28593.210778] SLOW spr round 18 (radius: 5) [04:48:22 -28593.210523] SLOW spr round 19 (radius: 10) [04:50:06 -28593.210516] SLOW spr round 20 (radius: 15) [04:52:15 -28593.210515] SLOW spr round 21 (radius: 20) [04:55:11 -28593.210515] SLOW spr round 22 (radius: 25) [04:59:01 -28593.210515] Model parameter optimization (eps = 0.100000) [04:59:08] [worker #0] ML tree search #9, logLikelihood: -28593.166966 [04:59:08 -202716.854806] Initial branch length optimization [04:59:11 -158151.996610] Model parameter optimization (eps = 10.000000) [04:59:51 -157550.092158] AUTODETECT spr round 1 (radius: 5) [05:01:59 -98168.773774] AUTODETECT spr round 2 (radius: 10) [05:04:11 -64744.284381] AUTODETECT spr round 3 (radius: 15) [05:06:21 -46206.243602] AUTODETECT spr round 4 (radius: 20) [05:08:42 -42380.546155] AUTODETECT spr round 5 (radius: 25) [05:11:32 -40073.466167] SPR radius for FAST iterations: 25 (autodetect) [05:11:32 -40073.466167] Model parameter optimization (eps = 3.000000) [05:11:52 -40061.185625] FAST spr round 1 (radius: 25) [05:13:54 -31877.242620] FAST spr round 2 (radius: 25) [05:15:44 -29739.680783] FAST spr round 3 (radius: 25) [05:17:23 -28779.810362] FAST spr round 4 (radius: 25) [05:18:51 -28646.056750] FAST spr round 5 (radius: 25) [05:20:14 -28641.638670] FAST spr round 6 (radius: 25) [05:21:36 -28641.638665] Model parameter optimization (eps = 1.000000) [05:21:53 -28628.463734] SLOW spr round 1 (radius: 5) [05:23:31 -28621.591696] SLOW spr round 2 (radius: 5) [05:24:31] [worker #1] ML tree search #10, logLikelihood: -28593.939954 [05:25:08 -28617.334218] SLOW spr round 3 (radius: 5) [05:26:46 -28617.056045] SLOW spr round 4 (radius: 5) [05:28:23 -28617.055397] SLOW spr round 5 (radius: 10) [05:30:05 -28616.284742] SLOW spr round 6 (radius: 5) [05:32:08 -28616.284499] SLOW spr round 7 (radius: 10) [05:34:01 -28615.935358] SLOW spr round 8 (radius: 5) [05:35:57 -28615.935304] SLOW spr round 9 (radius: 10) [05:37:45 -28615.935273] SLOW spr round 10 (radius: 15) [05:39:52 -28614.374832] SLOW spr round 11 (radius: 5) [05:41:58 -28610.396514] SLOW spr round 12 (radius: 5) [05:43:49 -28610.396460] SLOW spr round 13 (radius: 10) [05:45:34 -28610.396452] SLOW spr round 14 (radius: 15) [05:47:40 -28610.396444] SLOW spr round 15 (radius: 20) [05:50:27 -28610.396444] SLOW spr round 16 (radius: 25) [05:54:00 -28610.396444] Model parameter optimization (eps = 0.100000) [05:54:11] [worker #0] ML tree search #11, logLikelihood: -28609.612199 [05:54:11 -202880.407179] Initial branch length optimization [05:54:14 -158874.313470] Model parameter optimization (eps = 10.000000) [05:54:50 -158222.963927] AUTODETECT spr round 1 (radius: 5) [05:56:53 -91525.730237] AUTODETECT spr round 2 (radius: 10) [05:59:05 -62493.504785] AUTODETECT spr round 3 (radius: 15) [06:01:16 -47624.902599] AUTODETECT spr round 4 (radius: 20) [06:03:32 -41492.183918] AUTODETECT spr round 5 (radius: 25) [06:06:04 -40158.265921] SPR radius for FAST iterations: 25 (autodetect) [06:06:04 -40158.265921] Model parameter optimization (eps = 3.000000) [06:06:26 -40124.385158] FAST spr round 1 (radius: 25) [06:08:26 -31062.275007] FAST spr round 2 (radius: 25) [06:10:07 -29452.314888] FAST spr round 3 (radius: 25) [06:11:42 -29047.898039] FAST spr round 4 (radius: 25) [06:13:13 -28860.688051] FAST spr round 5 (radius: 25) [06:14:43 -28748.745436] FAST spr round 6 (radius: 25) [06:16:09 -28712.774205] FAST spr round 7 (radius: 25) [06:17:26] [worker #1] ML tree search #12, logLikelihood: -28603.796582 [06:17:38 -28643.286658] FAST spr round 8 (radius: 25) [06:19:00 -28641.460816] FAST spr round 9 (radius: 25) [06:20:23 -28641.460736] Model parameter optimization (eps = 1.000000) [06:20:42 -28632.748522] SLOW spr round 1 (radius: 5) [06:22:19 -28628.132666] SLOW spr round 2 (radius: 5) [06:23:57 -28627.933372] SLOW spr round 3 (radius: 5) [06:25:34 -28627.507291] SLOW spr round 4 (radius: 5) [06:27:11 -28627.507224] SLOW spr round 5 (radius: 10) [06:28:52 -28627.429247] SLOW spr round 6 (radius: 15) [06:31:09 -28627.429215] SLOW spr round 7 (radius: 20) [06:33:51 -28620.605429] SLOW spr round 8 (radius: 5) [06:36:02 -28617.756880] SLOW spr round 9 (radius: 5) [06:37:57 -28617.756838] SLOW spr round 10 (radius: 10) [06:39:44 -28608.342278] SLOW spr round 11 (radius: 5) [06:41:42 -28605.132498] SLOW spr round 12 (radius: 5) [06:43:28 -28605.132453] SLOW spr round 13 (radius: 10) [06:45:11 -28605.132445] SLOW spr round 14 (radius: 15) [06:47:20 -28605.132431] SLOW spr round 15 (radius: 20) [06:50:04 -28605.132429] SLOW spr round 16 (radius: 25) [06:53:34 -28605.132428] Model parameter optimization (eps = 0.100000) [06:53:47] [worker #0] ML tree search #13, logLikelihood: -28604.973739 [06:53:47 -200806.887541] Initial branch length optimization [06:53:49 -157030.239685] Model parameter optimization (eps = 10.000000) [06:54:31 -156434.278177] AUTODETECT spr round 1 (radius: 5) [06:56:34 -92176.293423] AUTODETECT spr round 2 (radius: 10) [06:58:49 -63215.681370] AUTODETECT spr round 3 (radius: 15) [07:00:57 -46008.937300] AUTODETECT spr round 4 (radius: 20) [07:03:13 -42395.506554] AUTODETECT spr round 5 (radius: 25) [07:05:47 -38529.350137] SPR radius for FAST iterations: 25 (autodetect) [07:05:47 -38529.350137] Model parameter optimization (eps = 3.000000) [07:06:06 -38510.815580] FAST spr round 1 (radius: 25) [07:08:05 -29668.048288] FAST spr round 2 (radius: 25) [07:09:45 -28750.975027] FAST spr round 3 (radius: 25) [07:11:15 -28661.769158] FAST spr round 4 (radius: 25) [07:12:43 -28649.185559] FAST spr round 5 (radius: 25) [07:14:09 -28639.317721] FAST spr round 6 (radius: 25) [07:15:33 -28637.549372] FAST spr round 7 (radius: 25) [07:16:56 -28637.548557] Model parameter optimization (eps = 1.000000) [07:17:13 -28626.453716] SLOW spr round 1 (radius: 5) [07:18:53 -28618.761918] SLOW spr round 2 (radius: 5) [07:20:32 -28618.011891] SLOW spr round 3 (radius: 5) [07:22:08 -28617.983000] SLOW spr round 4 (radius: 10) [07:23:49 -28617.633872] SLOW spr round 5 (radius: 5) [07:25:48 -28617.633863] SLOW spr round 6 (radius: 10) [07:27:41 -28617.633861] SLOW spr round 7 (radius: 15) [07:28:14] [worker #1] ML tree search #14, logLikelihood: -28602.758939 [07:29:56 -28616.943503] SLOW spr round 8 (radius: 5) [07:32:00 -28616.943496] SLOW spr round 9 (radius: 10) [07:33:57 -28616.943493] SLOW spr round 10 (radius: 15) [07:36:12 -28616.943491] SLOW spr round 11 (radius: 20) [07:39:12 -28616.184821] SLOW spr round 12 (radius: 5) [07:41:20 -28616.183959] SLOW spr round 13 (radius: 10) [07:43:20 -28616.183959] SLOW spr round 14 (radius: 15) [07:45:33 -28616.183959] SLOW spr round 15 (radius: 20) [07:48:33 -28616.183959] SLOW spr round 16 (radius: 25) [07:52:29 -28615.840125] SLOW spr round 17 (radius: 5) [07:54:37 -28615.840067] SLOW spr round 18 (radius: 10) [07:56:38 -28615.840067] SLOW spr round 19 (radius: 15) [07:58:51 -28615.840067] SLOW spr round 20 (radius: 20) [08:01:52 -28615.840067] SLOW spr round 21 (radius: 25) [08:05:48 -28615.840066] Model parameter optimization (eps = 0.100000) [08:05:55] [worker #0] ML tree search #15, logLikelihood: -28615.788152 [08:05:55 -203193.795636] Initial branch length optimization [08:05:58 -158827.789164] Model parameter optimization (eps = 10.000000) [08:06:39 -158147.525012] AUTODETECT spr round 1 (radius: 5) [08:08:45 -91438.811072] AUTODETECT spr round 2 (radius: 10) [08:10:59 -61920.783910] AUTODETECT spr round 3 (radius: 15) [08:13:03] [worker #1] ML tree search #16, logLikelihood: -28637.166872 [08:13:10 -44975.478892] AUTODETECT spr round 4 (radius: 20) [08:15:36 -39312.494255] AUTODETECT spr round 5 (radius: 25) [08:18:29 -35254.122264] SPR radius for FAST iterations: 25 (autodetect) [08:18:29 -35254.122264] Model parameter optimization (eps = 3.000000) [08:18:58 -35239.870355] FAST spr round 1 (radius: 25) [08:20:55 -29138.358601] FAST spr round 2 (radius: 25) [08:22:34 -28670.038335] FAST spr round 3 (radius: 25) [08:24:02 -28629.695912] FAST spr round 4 (radius: 25) [08:25:27 -28628.005772] FAST spr round 5 (radius: 25) [08:26:50 -28622.991927] FAST spr round 6 (radius: 25) [08:28:10 -28622.991586] Model parameter optimization (eps = 1.000000) [08:28:26 -28614.986433] SLOW spr round 1 (radius: 5) [08:30:01 -28610.226170] SLOW spr round 2 (radius: 5) [08:31:36 -28610.224765] SLOW spr round 3 (radius: 10) [08:33:17 -28608.654836] SLOW spr round 4 (radius: 5) [08:35:16 -28608.286561] SLOW spr round 5 (radius: 5) [08:37:03 -28608.286429] SLOW spr round 6 (radius: 10) [08:38:46 -28608.286332] SLOW spr round 7 (radius: 15) [08:40:52 -28606.908069] SLOW spr round 8 (radius: 5) [08:42:56 -28606.860346] SLOW spr round 9 (radius: 10) [08:44:51 -28606.271263] SLOW spr round 10 (radius: 5) [08:46:49 -28606.136955] SLOW spr round 11 (radius: 5) [08:48:34 -28606.136929] SLOW spr round 12 (radius: 10) [08:50:19 -28606.136914] SLOW spr round 13 (radius: 15) [08:52:27 -28606.136908] SLOW spr round 14 (radius: 20) [08:55:13 -28606.136905] SLOW spr round 15 (radius: 25) [08:58:44 -28606.136902] Model parameter optimization (eps = 0.100000) [08:58:54] [worker #0] ML tree search #17, logLikelihood: -28606.024894 [08:58:54 -201532.990824] Initial branch length optimization [08:58:58 -157289.567384] Model parameter optimization (eps = 10.000000) [08:59:37 -156600.187637] AUTODETECT spr round 1 (radius: 5) [09:01:44 -94307.868091] AUTODETECT spr round 2 (radius: 10) [09:03:58 -64657.401093] AUTODETECT spr round 3 (radius: 15) [09:06:12 -45741.293633] AUTODETECT spr round 4 (radius: 20) [09:08:36 -37187.457040] AUTODETECT spr round 5 (radius: 25) [09:11:38 -34934.786226] SPR radius for FAST iterations: 25 (autodetect) [09:11:38 -34934.786226] Model parameter optimization (eps = 3.000000) [09:11:57 -34921.415755] FAST spr round 1 (radius: 25) [09:13:55 -29171.749589] FAST spr round 2 (radius: 25) [09:15:38 -28742.997037] FAST spr round 3 (radius: 25) [09:17:13 -28687.880464] FAST spr round 4 (radius: 25) [09:18:43 -28677.679375] FAST spr round 5 (radius: 25) [09:20:05 -28667.485714] FAST spr round 6 (radius: 25) [09:21:27 -28667.485067] Model parameter optimization (eps = 1.000000) [09:21:45 -28651.295283] SLOW spr round 1 (radius: 5) [09:23:22 -28632.026790] SLOW spr round 2 (radius: 5) [09:24:58 -28631.085833] SLOW spr round 3 (radius: 5) [09:26:35 -28631.085264] SLOW spr round 4 (radius: 10) [09:28:17 -28631.025947] SLOW spr round 5 (radius: 15) [09:29:51] [worker #1] ML tree search #18, logLikelihood: -28641.941040 [09:30:29 -28630.018754] SLOW spr round 6 (radius: 5) [09:32:36 -28629.931455] SLOW spr round 7 (radius: 10) [09:34:32 -28628.812693] SLOW spr round 8 (radius: 5) [09:36:30 -28628.128520] SLOW spr round 9 (radius: 5) [09:38:18 -28626.028938] SLOW spr round 10 (radius: 5) [09:40:02 -28625.904356] SLOW spr round 11 (radius: 5) [09:41:40 -28625.904317] SLOW spr round 12 (radius: 10) [09:43:19 -28625.904281] SLOW spr round 13 (radius: 15) [09:45:27 -28625.904278] SLOW spr round 14 (radius: 20) [09:48:11 -28623.752462] SLOW spr round 15 (radius: 5) [09:50:20 -28620.595009] SLOW spr round 16 (radius: 5) [09:52:14 -28620.594872] SLOW spr round 17 (radius: 10) [09:53:59 -28617.752573] SLOW spr round 18 (radius: 5) [09:55:58 -28615.506471] SLOW spr round 19 (radius: 5) [09:57:46 -28611.874397] SLOW spr round 20 (radius: 5) [09:59:25 -28611.874374] SLOW spr round 21 (radius: 10) [10:01:04 -28611.874371] SLOW spr round 22 (radius: 15) [10:03:11 -28611.874368] SLOW spr round 23 (radius: 20) [10:05:56 -28611.874365] SLOW spr round 24 (radius: 25) [10:09:36 -28611.112805] SLOW spr round 25 (radius: 5) [10:11:42 -28611.112786] SLOW spr round 26 (radius: 10) [10:13:35 -28611.112783] SLOW spr round 27 (radius: 15) [10:15:39 -28611.112780] SLOW spr round 28 (radius: 20) [10:18:06] [worker #1] ML tree search #20, logLikelihood: -28607.134796 [10:18:23 -28611.112777] SLOW spr round 29 (radius: 25) [10:21:55 -28611.112774] Model parameter optimization (eps = 0.100000) [10:22:11] [worker #0] ML tree search #19, logLikelihood: -28610.624100 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.267944,0.419440) (0.446357,0.736133) (0.224566,1.711066) (0.061133,2.859164) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Final LogLikelihood: -28593.166966 AIC score: 61164.333932 / AICc score: 7977384.333932 / BIC score: 66692.010559 Free parameters (model + branch lengths): 1989 WARNING: Number of free parameters (K=1989) is larger than alignment size (n=119). This might lead to overfitting and compromise tree inference results! WARNING: Best ML tree contains 436 near-zero branches! Best ML tree with collapsed near-zero branches saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O14649/3_mltree/O14649.raxml.bestTreeCollapsed Best ML tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O14649/3_mltree/O14649.raxml.bestTree All ML trees saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O14649/3_mltree/O14649.raxml.mlTrees Optimized model saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O14649/3_mltree/O14649.raxml.bestModel Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O14649/3_mltree/O14649.raxml.log Analysis started: 05-Jul-2021 18:58:09 / finished: 06-Jul-2021 05:20:21 Elapsed time: 37331.603 seconds Consumed energy: 3282.550 Wh (= 16 km in an electric car, or 82 km with an e-scooter!)